1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...tatcttcaccttatattttattaagagcatatatcacctagtggcctgtagttgatcagcataactcttggattgtgacataattgccatgcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAATGTTGCACGTTCCCTGAGATATGAGATCAACAGGGGTTTTGCTACCTTG
species | Zea mays |
transcript | GRMZM2G004349_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211532251|gb|FL240253.1|FL240253
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTC-TCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211535240|gb|FL240256.1|FL240256
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211538248|gb|FL240274.1|FL240274
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTMTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAEST: gi|211538249|gb|FL240275.1|FL240275
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAAGATCCCAEST: gi|32913134|gb|CF017946.1|CF017946
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAA-GATCCCA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|76933464|gb|DV173471.1|DV173471
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|26559591|gb|CA831826.1|CA831826
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|149026779|gb|EE046142.2|EE046142
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211538246|gb|FL240272.1|FL240272
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCMAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAEST: gi|78090540|gb|DV518914.1|DV518914
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGA
EST: CTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211115304|gb|FL172236.1|FL172236
genomic: CTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|22715413|gb|BU197749.1|BU197749
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|30307151|gb|CD001824.1|CD001824
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211535241|gb|FL240257.1|FL240257
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|78115575|gb|DV533963.1|DV533963
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|24773135|gb|CA408389.1|CA408389
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|34391153|gb|CF384381.1|CF384381
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211137966|gb|FK978944.1|FK978944
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATEST: gi|211137036|gb|FK978936.1|FK978936
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGAT
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|149067456|gb|EE157665.2|EE157665
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211535244|gb|FL240260.1|FL240260
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTEST: gi|78090541|gb|DV518915.1|DV518915
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGT
EST: CTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211116081|gb|FL172238.1|FL172238
genomic: CTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|87156428|gb|DY401217.1|DY401217
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211535252|gb|FL240268.1|FL240268
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTTCCTAACATCCCCGAGGTGAAEST: gi|76933462|gb|DV173470.1|DV173470
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCT-CCTAACATCCCCGAGGTGAA
EST: GTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|149000370|gb|EE037534.2|EE037534
genomic: GTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: GTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|101388885|gb|EB816424.1|EB816424
genomic: GTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211538256|gb|FL240282.1|FL240282
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCANTGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|148931531|gb|EC874584.2|EC874584
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211137965|gb|FK978943.1|FK978943
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGEST: gi|9952753|gb|BE639216.1|BE639216
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTG
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|71438089|gb|DR819139.1|DR819139
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|71435537|gb|DR816587.1|DR816587
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|67015492|gb|CO444241.1|CO444241
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|14203412|gb|BG837089.1|BG837089
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|149000371|gb|EE037535.2|EE037535
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211535243|gb|FL240259.1|FL240259
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATEST: gi|31612033|gb|CD568655.1|CD568655
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGAT
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|24934739|gb|CA452957.1|CA452957
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|148965338|gb|EC906111.2|EC906111
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|71764684|gb|DR962621.1|DR962621
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|71304053|gb|DR788148.1|DR788148
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAAEST: gi|211137033|gb|FK978933.1|FK978933
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGEST: gi|211538251|gb|FL240277.1|FL240277
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTG
EST: CCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGAEST: gi|211137029|gb|FK978929.1|FK978929
genomic: CCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTT--CATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGA
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCEST: gi|26557842|gb|CA830077.1|CA830077
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCC
EST: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAA GTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
genomic: ACCCTGGCCATCCTGTTCCTCTGGTCCAATGCCACGACTTTCATCAACAAgtgagttagt ... gcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAA
ctgtagttgatcagcataactcttggattgtgacataattgccatgcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAATGTTGCACGTTCCCTGAGATATGAGATCAACAGGGGTTTTGCTACCTTG
gcataac putative branch site (score: 222)
atattta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tatcttcaccttatattttattaagagcatatatcacctagtggcctgtagttgatcagcataactcttggattgtgacataattgccatgcatatttagGTCTCCTCCTAACATCCCCGAGGTGAAGATCCCAGATGACCTGGCTGTGAATGTTGCACGTTCCCTGAGATATGAGATCAACAGGGGTTTTGCTACCTTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- -cttcacc
- - - - - - - - - - - - - - - - - - - - - -gcctgta
- - - - - - - - - - - - - - - - - - - - - - - - - - - atcagca