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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtaaatgaactcgttactaattttgtttgtggttatgagtaatttgttgatgtgatttactaattttgtttgtagCTAAAGGGTTTGCAAAAGCAAATAGATGGTGTATCGCATTACATGAAACTTAAAGACCATAATTGGTCAGACCTTCAAGTTGCTTATTGGCTTTGGAAAC

Basic information

species Zea mays
transcript AC197544.3_FGT002
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttttgtttgtggttatgagtaatttgttgatgtgatttactaattttgtttgtagCTAAAGGGTTTGCAAAAGCAAATAGATGGTGTATCGCATTACATGAAACTTAAAGACCATAATTGGTCAGACCTTCAAGTTGCTTATTGGCTTTGGAAAC
                                     tactaat  putative branch site (score: 1)
                                           ttttgttt  CT-rich tract
                                  atttactaattttgtt  TA-rich tract