1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' |
gtaggtgtttggagattttttaaataagtttgggtcttcagcatgaaaagatatttttattcgtctcttgttacgatgatgtaaaattctagtttgttctgaaaatcaatcttttgattttctgattttatttttagGAATTCTTTAGATGCCTTGCAATCTGTCATACAGTTCTTCCAGAGGGTGAGGAGACTCCGGAAAAGATAAGTTACCAGGCTGCCTCACCTGATGAGGCTG
species | Zea mays |
transcript | GRMZM2G326677_T01 |
intron # | 18 |
splice site | 3' |
intron type | U2 |
EST: GAATCATGCGCGGTGCATGGAGAAACGAACCTAATCCTGAGGCTTGCAAG GAATTCTTTAGATGCCTTGCAATCTGTCATACAGTTCTTCCAGAGGGTGAGEST: gi|87153181|gb|DY397970.1|DY397970
genomic: GAATCATGCGCGGTGCATGGAGAAACGAACCTAATCCTGAGGCTTGCAAGgtaggtgttt ... ttatttttagGAATTCTTTAGATGCCTTGCAATCTGTCATACAGTTCTTCCAGAGGGTGAG
EST: GAATCATGCGCGGTGCATGGAGAAACGAACTTAATCCTGAGGCTCGCAAG GAATTCTTTAGATGCCTTGCAATCTGTCATACAGTTCTTCCAGAGGGTGAGEST: gi|22491255|gb|BU051178.1|BU051178
genomic: GAATCATGCGCGGTGCATGGAGAAACGAACCTAATCCTGAGGCTTGCAAGgtaggtgttt ... ttatttttagGAATTCTTTAGATGCCTTGCAATCTGTCATACAGTTCTTCCAGAGGGTGAG
EST: GAATCATGCGCGGTGCATGGAGAAACGAACCTAATCCTGAGGCTTGCAAG GAATTCTTTAGATGCCTTGCAATCTATAATACAGTTCTTCCAGAGGGTGAG
genomic: GAATCATGCGCGGTGCATGGAGAAACGAACCTAATCCTGAGGCTTGCAAGgtaggtgttt ... ttatttttagGAATTCTTTAGATGCCTTGCAATCTGTCATACAGTTCTTCCAGAGGGTGAG
aaaattctagtttgttctgaaaatcaatcttttgattttctgattttatttttagGAATTCTTTAGATGCCTTGCAATCTGTCATACAGTTCTTCCAGAGGGTGAGGAGACTCCGGAAAAGATAAGTTACCAGGCTGCCTCACCTGATGAGGCTG
ttctgat putative branch site (score: 188)
ttttattttt CT-rich tract
aaaatcaatcttttga TA-rich tract