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gttcaattttctactctcatatgcttcggtaacatttatcctcatatttcagtagcaatgatctgttgtgttacattatattatgcagGGATGTGATGCTGTACAGCGAATGCTTGTAAATCCCCAATGCAGTATTAGATCTCTCAGCCTTGACAAATGCAATCTTGGACTTGCTGGAATTGTCCGTG
species | Zea mays |
transcript | GRMZM2G472023_T02 |
intron # | 17 |
splice site | 3' |
intron type | U2 |
EST: GGATCAATATTCTTGAGTTAAACCTTGGAGGAAATCCAATTAACCTGGAG GGATGTGATGCTGTACAGCGAATGCTTGTAAATCCCCAATGCAGTATTAGAEST: gi|22543173|gb|BU093611.1|BU093611
genomic: GGATCAATATTCTTGAGTTAAACCTTGGAGGAAATCCAATTAACCTGGAGgttcaatttt ... tattatgcagGGATGTGATGCTGTACAGCGAATGCTTGTAAATCCCCAATGCAGTATTAGA
EST: GGATCAATATTCTTGAGTTAAACCTTGGAGGAAATCCAATTAACCTGGAG GGATGTGATGCTGTACAGCGAATEST: gi|22545547|gb|BU097906.1|BU097906
genomic: GGATCAATATTCTTGAGTTAAACCTTGGAGGAAATCCAATTAACCTGGAGgttcaatttt ... tattatgcagGGATGTGATGCTGTACAGCGAAT
EST: GGATCAATATTCTTGAGTTAAACCTTGGAGGAAATCCAATTAACCTGGAG GGATGTGATGCTGTACAGCGAATGCTTGTAAATCCCCAATGCAGTATTAGAEST: gi|211497818|gb|FL217202.1|FL217202
genomic: GGATCAATATTCTTGAGTTAAACCTTGGAGGAAATCCAATTAACCTGGAGgttcaatttt ... tattatgcagGGATGTGATGCTGTACAGCGAATGCTTGTAAATCCCCAATGCAGTATTAGA
EST: GGATCAATATTCTTGAGTTAAACCTTGGAGGAAATCCAATTAACCTGGAG GGATGTGATGCTGTACAGCGAATGCTTGTAAATCCCCAATGCAGTATTAGA
genomic: GGATCAATATTCTTGAGTTAAACCTTGGAGGAAATCCAATTAACCTGGAGgttcaatttt ... tattatgcagGGATGTGATGCTGTACAGCGAATGCTTGTAAATCCCCAATGCAGTATTAGA
atttatcctcatatttcagtagcaatgatctgttgtgttacattatattatgcagGGATGTGATGCTGTACAGCGAATGCTTGTAAATCCCCAATGCAGTATTAGATCTCTCAGCCTTGACAAATGCAATCTTGGACTTGCTGGAATTGTCCGTG
tgttacattatattat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttcaattttctactctcatatgcttcggtaacatttatcctcatatttcagtagcaatgatctgttgtgttacattatattatgcagGGATGTGATGCTGTACAGCGAATGCTTGTAAATCCCCAATGCAGTATTAGATCTCTCAGCCTTGACAAATGCAATCTTGGACTTGCTGGAATTGTCCGTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA