1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
...attaccatagtaaagtaattaagctaggctttacttgcatacaccatggagtccttaacctgttttctttttcttgttttttcattctttctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTGGGATCAGCAACGTGTATCTGGGATTTGCATCAGTATGTGCCCTTGCAG
species | Zea mays |
transcript | GRMZM2G153704_T01 |
intron # | 17 |
splice site | 3' |
intron type | U2 |
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|101389575|gb|EB816720.1|EB816720
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|67035008|gb|CO463541.1|CO463541
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGATTAAGGGCCAAGGCTGTTGCATTATCTCCANGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGCCG-GAGCAEST: gi|211050165|gb|FL124866.1|FL124866
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCA
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTCAGCAAGTTTEST: gi|211050168|gb|FL124869.1|FL124869
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|149071544|gb|EE159937.2|EE159937
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|60355926|gb|DN222899.1|DN222899
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|149109615|gb|EE293402.2|EE293402
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|116826239|gb|EC870015.1|EC870015
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAEST: gi|149055221|gb|EE156146.2|EE156146
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAA
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|67011667|gb|CO440416.1|CO440416
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTTGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|211050172|gb|FL124873.1|FL124873
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTCAGCAAGTTTEST: gi|211050170|gb|FL124871.1|FL124871
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTCAGCAAGTTTEST: gi|60351782|gb|DN218755.1|DN218755
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|33092425|gb|CF052419.1|CF052419
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|60401429|gb|DN234236.1|DN234236
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|211106867|gb|FL216747.1|FL216747
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTCAGCAAGTTTEST: gi|94472602|gb|EB701560.1|EB701560
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|60353755|gb|DN220728.1|DN220728
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|60358931|gb|DN225904.1|DN225904
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|78075827|gb|DV504261.1|DV504261
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|60355312|gb|DN222285.1|DN222285
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|18963572|gb|BM660510.1|BM660510
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|148996906|gb|EE035710.2|EE035710
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTEST: gi|110951781|gb|EE171833.1|EE171833
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
EST: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGG GTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
genomic: CCTCGAGAATAAGGGCCAAGGCTGTCGCATTATCTCTAGGCATGCACTGGgtgagtcatg ... ctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTT
atggagtccttaacctgttttctttttcttgttttttcattctttctttcttcagGTATCTAACTTTTTCATTGGCCTGTACTTCCTGAGTGTCGTGAGCAAGTTTGGGATCAGCAACGTGTATCTGGGATTTGCATCAGTATGTGCCCTTGCAG
ccttaac putative branch site (score: 3)
cctgttttctttttct CT-rich tract
tttttcttgtttttt TA-rich tract