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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...cttcttaagaatttttttccaatctcatccaatccatgtgtattgggaataaccgaacaaagcctggtgtgaacactattctttgcccatgttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAACCACTTTGGACTATCTGAAGCACG

Basic information

species Zea mays
transcript GRMZM2G063851_T04
intron # 17
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G063851_T05 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os11g33240.2 (Oryza sativa), 3'ss of exon 17
--cttcttaagaatttttttccaatctcatccaatccatgtgtattgggaataaccgaacaaagcctggtgtgaacactattctttgcccatgttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAACCACTTTGGACTATCTGAAGCACG
    |   |  |  ||  |    ||  |  ||  |  ||||  ||      | |  |   |||     |||  ||||       ||| |||| ||| |  ||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||
gtaatgccactagattgatcatgattgctaccgttttatgtccatc-----ttattggctaaaa---agtgacaaca-------ttgtccatatttcc--agGTCAAAAACCCATGGCCTAATGTTGATGCTCACAGTGGAGTTCTGCTGAACCACTTTGGATTATCTGAAGCTCG

upper sequence: GRMZM2G063851_T05 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os02g10070.1 (Oryza sativa), 3'ss of exon 17
------cttcttaagaatttttttccaat--ctcatccaatccatgtgtattgggaataaccgaacaaagcctggtgtgaacactattctttgcccatgttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAACCACTTTGGACTATCTGAAGCACG
      || ||  |    |   |    ||  ||| |  |||    |    ||  |  ||     |        | |  |||       | |    ||  |||||  ||||||| ||||||||||| ||||||||||||||||| |||||| | ||||||||||||||| |||||||||| ||
gtaatgctactagattgatcaataattattgctcctttaattacggctccttcagtttacttccatctcattggctaagaaataagaacatccttcacattttc--agGTCAAAAACCCATGGCCTAATGTTGATGCTCACAGCGGAGTTCTACTGAACCACTTTGGATTATCTGAAGCTCG

upper sequence: GRMZM2G063851_T05 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA08G16770.1 (Glycine max), 3'ss of exon 17
cttcttaagaatttttttcca-atctcatccaatccatg-tgtattgggaataaccgaa--caaagcctggtgtgaacactattctttgcccatgttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAACCACTTTGGACTATCTGAAGCACG
  || ||   |||       | | |  ||  | ||  || | | |||  | ||   | |    |  |||| |  ||     |   |  |       |     |||| || || |||||||| |||||||||||||||||||||||  | |||||| | | ||| ||| |||| | |  
--tcatacacattaaaccggataacagatgtactcattgctctcttgctattagttgtaatttattcctgatacgactg--aacttgagttttaaatggtgtagGTTAAAAATCCATGGCCTAATGTTGATGCTCACAGTGGAGTGCTACTGAACTATTATGGTCTAACTGAGGAAAA

upper sequence: GRMZM2G063851_T05 (Zea mays), 3'ss of exon 3
lower sequence: AT3G60100.1 (Arabidopsis thaliana), 3'ss of exon 16
cttcttaagaatttttttccaatctcatccaatccatgtgtattgggaataaccgaacaaagcctggtgtgaacactattctttgcccatgttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAACCACTTTGGACTATCTGAAGCACG
            |  |    |  ||||| || | ||||||      || |  | ||       ||||| | |    |     |||    || | | ||||||||||||||| ||||| || ||||||||||| || |||||  | |||||| ||| ||| ||| | |||||| |
-----------gtactacttatactcattcatttcatgtgctaccagattttctgattttc-tctggtttta----tgaatcttgaaattgctgtatcagGTCAAGAACCCGTGGCCTAACGTTGATGCTCATAGCGGAGTGCTTCTGAACTACTATGGTCTAACCGAAGCAAG

upper sequence: GRMZM2G063851_T05 (Zea mays), 3'ss of exon 3
lower sequence: AT2G44350.2 (Arabidopsis thaliana), 3'ss of exon 17
------------------------------------------cttcttaagaatttttttccaatctcatcca-atccatgtgtattgggaataac---cgaa-caaagcctggtgtgaacactattctttgcccatgttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAACCACTTTGGACTATCTGAAGCACG
                                           | |   |  |  |       | || | | | || |  | |  ||  ||||  |   |||| |||    |  | |     | | ||          || |  ||||| |||||||| |||||||||||||||||||||||||| || ||||||||||||| ||| ||| | |||||| |
gtagtatctctatccttcgtttaccatggtgatccttcaatattccaccaacaactccacaacaccttacctacatgctaggggcttatgaatctcttgcgaatcaattttttatttacttgcgaatccgatgatggcttgttacagGTGAAGAACCCGTGGCCAAATGTTGATGCTCACAGTGGGGTCTTGCTGAACCACTATGGTCTAACCGAAGCAAG

upper sequence: GRMZM2G063851_T05 (Zea mays), 3'ss of exon 3
lower sequence: Vv13s0156g00180.t01 (Vitis vinifera), 3'ss of exon 17
cttcttaagaatttttttccaatctcatccaatccatgt--gtattgggaataaccgaacaaagcctggtgtgaacactattctttgcccatgttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAACCACTTTGGACTATCTGAAGCACG
 |    || |    |  |  |||    |  |||  |  |  |  |  |  ||| | |     ||      ||||    | ||              |   |||| || ||||||||||| ||||| |||||||||||||| || ||||||||||| |||||  ||   ||||||||
ttctgcaacatgcctactagaattctgtaaaataaactttggcttcagtgatacctg--tggagttaacagtgattgtttttgggatttgggacacttgtagGTTAAAAACCCATGGCCCAATGTCGATGCTCACAGTGGGGTCTTGCTGAACCATTTTGGTTTACACGAAGCACG

upper sequence: GRMZM2G063851_T05 (Zea mays), 3'ss of exon 3
lower sequence: PP1S37_33V6.1 (Physcomitrella patens), 3'ss of exon 11
-----------cttcttaagaatttttttc--caatctcatccaatccatgtgtattgggaataaccgaacaaagcctggtgtgaacactattctttgcccatgttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAACCACTTTGGACTATCTGAAGCACG
               ||||||| ||| |     | || |   |||   |      |           |||   |   ||  ||    |||  | || |     |  |  ||||||||||||||| ||||| ||||| ||||||||||| || ||  ||||  |  |||  ||  |    |||     
gtaagtttcgaaggtttaagaactttatgaagtagtcgccgtcaagaaaaaaaattccacttcttttgaagtcattttgaagtct-tacttgtgttcgtgtgcgagtgatcagGTCAAGAACCCCTGGCCTAATGTGGATGCTCACAGCGGTGTCCTGCTTCAGTACTACGGCTTGAAAGAACAGAA

upper sequence: GRMZM2G063851_T05 (Zea mays), 3'ss of exon 3
lower sequence: PP1S163_94V6.1 (Physcomitrella patens), 3'ss of exon 15
------------------------------------------cttcttaagaatttttttccaatct------catccaatccat--gtgtattgggaataaccgaacaaagcctggtgtgaac-------actattcttt--gcccatgttttct---cagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAACCACTTTGGACTATCTGAAGCACG
                                           |   |  ||||||   |      |      || |||     |  |  || |||   ||  |     | ||  | |   |||       |||| ||||   |  |||  ||| |   ||||| || ||||||||||| ||||| |||||||| |||||||| |||||  | |||| ||| ||    |||     
gtacggtttttttatgtctgtccaccacaataggcctagatattcaatttgaatttaacttgggagtaaaaagcacccagctactcggaataatggttgtagtcacttcatgcaagattgtaacgctcgtgactagtcttccagtgcataattttttgacagGTAAAAAACCCATGGCCGAATGTAGATGCTCATAGTGGAGTATTGCTTCAACACTATGGTCTGAAAGAACAGAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33100125|gb|CF060085.1|CF060085
EST:     ACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: ACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|40335071|gb|CK369141.1|CK369141
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|84908305|gb|DW404183.1|DW404183
EST:     TACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|89248619|gb|DY620405.1|DY620405
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|5901109|gb|AW042209.1|AW042209
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|116813560|gb|EC856011.1|EC856011
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|78179069|gb|DV549442.1|DV549442
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCCAATGTTGATGCTCA
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCA
EST: gi|31364242|gb|CD448597.1|CD448597
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|148929642|gb|EC876096.2|EC876096
EST:     TGTGCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|76010584|gb|DT937754.1|DT937754
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|31363851|gb|CD448206.1|CD448206
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|149100798|gb|EE186892.2|EE186892
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|6973552|gb|AW438288.1|AW438288
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGGTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|110202089|gb|EC883986.1|EC883986
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|71771088|gb|DR969025.1|DR969025
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|78021514|gb|DV489901.1|DV489901
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|37380261|gb|CF626924.1|CF626924
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|241994796|gb|GR421149.1|GR421149
EST:     CCTCCTATCCTCANTGAGNTGGGCAAG                         GTCAAGAACCCANGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: CCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|32796104|gb|CD948340.1|CD948340
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|110954440|gb|EE174492.1|EE174492
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|76010585|gb|DT937755.1|DT937755
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|148991805|gb|EE033386.2|EE033386
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|93284645|gb|EB676909.1|EB676909
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|149082973|gb|EE172210.2|EE172210
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
EST: gi|60395299|gb|DN228168.1|DN228168
EST:     TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAG                         GTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC
genomic: TGTCCAAGTTGTATGAAGTTGTACCTCCTATCCTCACTGAGCTGGGCAAGgtaatgtgat ... gttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAAC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggaataaccgaacaaagcctggtgtgaacactattctttgcccatgttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAACCACTTTGGACTATCTGAAGCACG
 gaataac  putative branch site (score: 2)
                                            tgttttctc  putative PPT
                               tattcttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
cttcttaagaatttttttccaatctcatccaatccatgtgtattgggaataaccgaacaaagcctggtgtgaacactattctttgcccatgttttctcagGTCAAGAACCCATGGCCAAATGTTGATGCTCACAGTGGAGTTTTGCTGAACCACTTTGGACTATCTGAAGCACG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC