1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' |
...gcttcatgaatctctgttgctaagcagcacttatttgtatccacttgcatggatgcgataagtttgaattactgattgcaatatgcttttggtctttcagATCTTATGTACTGTACAGAAGCATATACTTCAGGGAGGCCCCAAGCGTCTAACTTTCACTGTGCCTTCGTTAGTATTCTCTTCTCTTAAG
species | Zea mays |
transcript | GRMZM5G844195_T02 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: CGCGTCTCATTCACATGCTGCACAATGATGATCCTGAAGAGATGCTGAAG ATCTTATGTACTGTACAGAAGCATATACTTCAGGGAGGCCCCAAGCGTCTAEST: gi|31353910|gb|CD438267.1|CD438267
genomic: CGCGTCTCATTCACATGCTGCACAATGATGATCCTGAAGAGATGCTGAAGgtaatttgtt ... ggtctttcagATCTTATGTACTGTACAGAAGCATATACTTCAGGGAGGCCCCAAGCGTCTA
EST: CGCGTCTCATTCACATGCTGCACAATGATGATCCTGAAGAGATGCTGAAG ATCTTATGTACTGTACAGAAGCATATACTTCAGGGAGGCCCCAAGCGTCTAEST: gi|31355451|gb|CD439808.1|CD439808
genomic: CGCGTCTCATTCACATGCTGCACAATGATGATCCTGAAGAGATGCTGAAGgtaatttgtt ... ggtctttcagATCTTATGTACTGTACAGAAGCATATACTTCAGGGAGGCCCCAAGCGTCTA
EST: CGCGTCTCATTCACATGCTGCACAATGATGATCCTGAAGAGATGCTGAAG ATCTTATGTACTGTACAGAAGCATATACTTCAGGGAGGCCCCAAGCGTCTAEST: gi|78088719|gb|DV517112.1|DV517112
genomic: CGCGTCTCATTCACATGCTGCACAATGATGATCCTGAAGAGATGCTGAAGgtaatttgtt ... ggtctttcagATCTTATGTACTGTACAGAAGCATATACTTCAGGGAGGCCCCAAGCGTCTA
EST: CGCGTCTCATTCACATGCTGCACAATGATGATCCTGAAGAGATGCTGAAG ATCTTATGTACTGTACAGAAGCATATACTTCAGGGAGGCCCCAAGCGTCTA
genomic: CGCGTCTCATTCACATGCTGCACAATGATGATCCTGAAGAGATGCTGAAGgtaatttgtt ... ggtctttcagATCTTATGTACTGTACAGAAGCATATACTTCAGGGAGGCCCCAAGCGTCTA
tgcatggatgcgataagtttgaattactgattgcaatatgcttttggtctttcagATCTTATGTACTGTACAGAAGCATATACTTCAGGGAGGCCCCAAGCGTCTAACTTTCACTGTGCCTTCGTTAGTATTCTCTTCTCTTAAG
tactgat putative branch site (score: 146)
tctttc putative PPT
ataagtttgaatta TA-rich tract