1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtataatacccttatcacatatataagctaatataactcataagatgctgaaagcattctgaatgaaaggctgattctgggaactttgcctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCCAACTGGTTGACGTCCTTTGGAATAACAATGACAGCAAATTTGCTTCTGA
species | Zea mays |
transcript | GRMZM2G160430_T01 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATGTCTGAG ATCCTTCCGGTTEST: gi|101387701|gb|EB815865.1|EB815865
genomic: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATGTCTGAGgtataatacc ... ctattgacagATCCTTCCGGTT
EST: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCTTGGATCATAATGTCTGAG ATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCACGACCCTTGCCEST: gi|37385615|gb|CF629958.1|CF629958
genomic: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATGTCTGAGgtataatacc ... ctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCC
EST: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCTTGGATCATAATGTCTGAG ATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCCEST: gi|113701345|gb|EE678849.1|EE678849
genomic: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATGTCTGAGgtataatacc ... ctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCC
EST: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCTTGGATCATAATGTCTGAG ATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCCEST: gi|37376279|gb|CF624650.1|CF624650
genomic: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATGTCTGAGgtataatacc ... ctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCC
EST: TGCCTTCTCCTTCGGTATGGGTTCCATTCC-TGGATCATAATGTTCTGAG ATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCEST: gi|148950293|gb|EC895852.2|EC895852
genomic: TGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATG-TCTGAGgtataatacc ... ctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGC
EST: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATGTCTGAG ATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCCEST: gi|5846979|gb|AW000058.1|AW000058
genomic: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATGTCTGAGgtataatacc ... ctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCC
EST: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATGTCTGAG ATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCC
genomic: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATGTCTGAGgtataatacc ... ctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCC
atgctgaaagcattctgaatgaaaggctgattctgggaactttgcctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCCAACTGGTTGACGTCCTTTGGAATAACAATGACAGCAAATTTGCTTCTGA
ggctgat putative branch site (score: 4)
ctttgcct putative PPT
aatgaaa TA-rich tract