Sequence
atgc intronic sequence ATGC exonic sequencegtgagccatatttttcttagttgatacttgctaggatcgttttttatgggaacctgtctaatttgtggtatattcaatagGTTGGCAATATGATCTTTTGGTTTTTTTTCTGCATATACGGGCAGCCAATGTGTGTTCTATTGTATTACCATGATGTGATGAACCGGACTGAGAAGGCAA
Basic information
Orthologous splice sites
atgc intronic sequence ATGC exonic sequence
upper sequence: GRMZM2G130749_T02 (Zea mays), 3'ss of exon 14
lower sequence: LOC_Os05g10810.1 (Oryza sativa), 3'ss of exon 15
gtgagccatatttttcttagttgatacttgctaggatcgttttttatgggaacctgt-ctaatttgtggtatattcaatagGTTGGCAATATGATCTTTTGGTTTTTTTTCTGCATATACGGGCAGCCAATGTGTGTTCTATTGTATTACCATGATGTGATGAACCGGACTGAGAAGGCAA
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gttagccacattttccatgattgcaattgaaaaacttctgttttaatgtaaatcagttctaactcgtgtcatctttaacagGTTGGCAACATGATATTTTGGTTCTTTTTCTGCATCTATGGGCAGCCAATGTGCCTTCTCCTGTACTATCATGATGTGATGAACAGGATTGAGAAGGCAAMapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211193694|gb|FL010949.1|FL010949EST: CCCTCATCATATTGACATCATACCTCAAAAATAAATTCAGTGACACAATG GTTGGCAATATGATCTTTTGG
genomic: CCCTCATCATATTGACATCATACCTCAAAAATAAATTCAGTGACACAATGgtgagccata ... tattcaatagGTTGGCAATATGATCTTTTGG
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.acttgctaggatcgttttttatgggaacctgtctaatttgtggtatattcaatagGTTGGCAATATGATCTTTTGGTTTTTTTTCTGCATATACGGGCAGCCAATGTGTGTTCTATTGTATTACCATGATGTGATGAACCGGACTGAGAAGGCAA
gtctaat putative branch site (score: 3)
tatattcaata TA-rich tract