Skip to another splice site:
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 5'  3'   		6  
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 5'  3'   		14  
 5'  3'   		15  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttcgtttcgtgccaccctgcatatttgtgccctcttgttggatcctttatcagctagagccctttaatttatctgcaagaactctttcatttctgcttccctctaacgctgcacgtttcgctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAGCTGAAGGCCCTCCCGTATGAACCTGGCAGCCGGGGACCCAAGGAAGCCG

Basic information

species Zea mays
transcript GRMZM2G130230_T02
intron # 15
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 15
lower sequence: LOC_Os04g40874.1 (Oryza sativa), 3'ss of exon 14
gttcgtttcgtgccaccctgcatatttgtgccctcttgttggatcctttatcagctagagccctttaatttatctgcaagaactctttcatttctgctt-ccctctaacgctgcacgtttcgctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAGCTGAAGGCCCTCCCGTATGAACCTGGCAGCCGGGGACCCAAGGAAGCCG
||| ||    || |||||||||||  |    |||||     ||  ||| |                | | | | | ||||  |  |||| |||| | || | | |||||      |   | |  | | |||||||||||| |||||||||||||  ||||||| ||||| ||||| |||||| ||||| |  | || ||  | ||||||||||| || |||||||||||||
gtttgtcagttgtcaccctgcatacctaaaacctctgaagagaaacttga----------------attctgtttccaag--ccgtttcgtttccgttttctccctaacatatggcacat-gtgtgtccagGCTGCTTGGCAGATCTTCACTCCCCTGCTGCACGACATCGACGAAGGCAAGGTGAAGTCTATTCCATACCAGCCTGGCAGCCGAGGCCCCAAGGAAGCCG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16922149|gb|BM075449.1|BM075449
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|17930351|gb|BM267311.1|BM267311
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18165893|gb|BM335732.1|BM335732
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|16922529|gb|BM075613.1|BM075613
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18167337|gb|BM337176.1|BM337176
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18168981|gb|BM338821.1|BM338821
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18164524|gb|BM334363.1|BM334363
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|16920887|gb|BM074878.1|BM074878
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|86473248|gb|DY239618.1|DY239618
EST:     TTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATTTTCATTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: TTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|17932281|gb|BM269241.1|BM269241
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18162462|gb|BM332301.1|BM332301
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18164802|gb|BM334641.1|BM334641
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18171197|gb|BM341037.1|BM341037
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|17931985|gb|BM268945.1|BM268945
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18167754|gb|BM337594.1|BM337594
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18163685|gb|BM333524.1|BM333524
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|17931883|gb|BM268843.1|BM268843
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18165691|gb|BM335530.1|BM335530
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18172923|gb|BM348311.1|BM348311
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|211061229|gb|FL436762.1|FL436762
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|211061228|gb|FL436761.1|FL436761
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18168298|gb|BM338138.1|BM338138
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|28985370|gb|CB350607.1|CB350607
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18162240|gb|BM332079.1|BM332079
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGGCGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18162461|gb|BM332300.1|BM332300
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18172314|gb|BM347702.1|BM347702
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|211211964|gb|FL383461.1|FL383461
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCYTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18165995|gb|BM335834.1|BM335834
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18174512|gb|BM349900.1|BM349900
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGATGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18170459|gb|BM340299.1|BM340299
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|78021317|gb|DV489704.1|DV489704
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|7137854|gb|AW499303.1|AW499303
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|16917290|gb|BM073219.1|BM073219
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|28986016|gb|CB350927.1|CB350927
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|17930593|gb|BM267553.1|BM267553
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|74237091|gb|DT645005.1|DT645005
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|16923080|gb|BM076072.1|BM076072
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18167519|gb|BM337358.1|BM337358
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|17930190|gb|BM267150.1|BM267150
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGATACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|40303860|gb|CK348247.1|CK348247
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18163622|gb|BM333461.1|BM333461
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|71757950|gb|DR955887.1|DR955887
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|6020578|gb|AW065611.1|AW065611
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|71449884|gb|DR830934.1|DR830934
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18175820|gb|BM350996.1|BM350996
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18166783|gb|BM336622.1|BM336622
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|211529383|gb|FL468953.1|FL468953
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|28986008|gb|CB350923.1|CB350923
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGATGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|32849799|gb|CD989480.1|CD989480
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18170373|gb|BM340213.1|BM340213
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18172047|gb|BM347435.1|BM347435
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18171848|gb|BM341688.1|BM341688
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18165503|gb|BM335342.1|BM335342
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|60357201|gb|DN224174.1|DN224174
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|78083438|gb|DV511831.1|DV511831
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|89757408|gb|DY687023.1|DY687023
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|16920409|gb|BM074643.1|BM074643
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18165971|gb|BM335810.1|BM335810
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18165599|gb|BM335438.1|BM335438
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18175462|gb|BM350778.1|BM350778
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTGACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|37389464|gb|CF631952.1|CF631952
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18163153|gb|BM332992.1|BM332992
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18163344|gb|BM333183.1|BM333183
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|211521491|gb|FL408970.1|FL408970
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18170152|gb|BM339992.1|BM339992
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18173363|gb|BM348751.1|BM348751
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18166460|gb|BM336299.1|BM336299
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|211255509|gb|FL452737.1|FL452737
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|14243764|gb|BG841395.2|BG841395
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18171055|gb|BM340895.1|BM340895
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18170269|gb|BM340109.1|BM340109
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18176129|gb|BM351195.1|BM351195
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|17930457|gb|BM267417.1|BM267417
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18174518|gb|BM349906.1|BM349906
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|4609528|gb|AI600367.1|AI600367
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|89759525|gb|DY688326.1|DY688326
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|16922740|gb|BM075732.1|BM075732
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18164763|gb|BM334602.1|BM334602
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18167594|gb|BM337434.1|BM337434
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18173628|gb|BM349016.1|BM349016
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|211153384|gb|FL395391.1|FL395391
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18163107|gb|BM332946.1|BM332946
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18171556|gb|BM341396.1|BM341396
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|17930752|gb|BM267712.1|BM267712
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGGCAACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|93283385|gb|EB675649.1|EB675649
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18164988|gb|BM334827.1|BM334827
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|86473854|gb|DY240224.1|DY240224
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|113701618|gb|EE679122.1|EE679122
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCTCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18174086|gb|BM349474.1|BM349474
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18170978|gb|BM340818.1|BM340818
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|16922705|gb|BM075697.1|BM075697
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|4609992|gb|AI600831.1|AI600831
EST:     GGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: GGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|16923088|gb|BM076080.1|BM076080
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
EST: gi|18164021|gb|BM333860.1|BM333860
EST:     AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG                         GCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG
genomic: AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 130

AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAGCTGAAGGCCCTCCCGTATGAACCTGGCAGCCGGGGACCCAAGGAAGCCG


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 261

AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAGCTGAAGGCCCTCCCGTATGAACCTGGCAGCCGGGGACCCAAGGAAGCCG


Block sizes: 47 (upstream exon), 49 (downstream exon)
Score: 247

AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAGCTGAAGGCCCTCCCGTATGAACCTGGCAGCCGGGGACCCAAGGAAGCCG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1314

AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAGgttcgtttcg ... gctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAGCTGAAGGCCCTCCCGTATGAACCTGGCAGCCGGGGACCCAAGGAAGCCG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcaagaactctttcatttctgcttccctctaacgctgcacgtttcgctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAGCTGAAGGCCCTCCCGTATGAACCTGGCAGCCGGGGACCCAAGGAAGCCG
                          ctctaac  putative branch site (score: 1314)
                                       cgtttcgctttttc  putative PPT
          tttcattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gttcgtttcgtgccaccctgcatatttgtgccctcttgttggatcctttatcagctagagccctttaatttatctgcaagaactctttcatttctgcttccctctaacgctgcacgtttcgctttttcagGCTGCTTGGAAGATCTTCACTCCTTTGCTGCATGACATTGACGACGGCAAGCTGAAGGCCCTCCCGTATGAACCTGGCAGCCGGGGACCCAAGGAAGCCG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA