1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gcaagcaaaaaaaaagttctctcatgcaccctagcctgtaatgtatctattgatctcagaaaactcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGCTCCAGGCCAGTATCAACGCTCTGGGATCAACCGCCACTGTTCTCACAT
species | Zea mays |
transcript | GRMZM2G077299_T03 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32915958|gb|CF020770.1|CF020770
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32834805|gb|CD974483.1|CD974483
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32832616|gb|CD972294.1|CD972294
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32838656|gb|CD978334.1|CD978334
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32846404|gb|CD986085.1|CD986085
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTACTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32866647|gb|CF006329.1|CF006329
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32915959|gb|CF020771.1|CF020771
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32847114|gb|CD986795.1|CD986795
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|31351830|gb|CD436187.1|CD436187
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32836113|gb|CD975791.1|CD975791
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32846779|gb|CD986460.1|CD986460
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32833806|gb|CD973484.1|CD973484
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32846254|gb|CD985935.1|CD985935
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|78108891|gb|DV527308.1|DV527308
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32847472|gb|CD987153.1|CD987153
genomic: CCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|74232032|gb|DT639946.1|DT639946
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32846575|gb|CD986256.1|CD986256
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32839169|gb|CD978850.1|CD978850
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGTTTCCTAAGAGTAAAG GTCATAAACTTATGGTAAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|17970148|gb|BM276913.1|BM276913
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|71769432|gb|DR967369.1|DR967369
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32847067|gb|CD986748.1|CD986748
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32833492|gb|CD973170.1|CD973170
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|22489289|gb|BU049212.1|BU049212
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32833419|gb|CD973097.1|CD973097
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32847159|gb|CD986840.1|CD986840
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32866646|gb|CF006328.1|CF006328
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32832289|gb|CD971967.1|CD971967
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32834130|gb|CD973808.1|CD973808
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32847619|gb|CD987300.1|CD987300
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32847167|gb|CD986848.1|CD986848
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32847649|gb|CD987330.1|CD987330
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32846820|gb|CD986501.1|CD986501
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGEST: gi|32832861|gb|CD972539.1|CD972539
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
EST: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAG GTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
genomic: CGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGgcaagcaaaa ... tcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGG
tctcatgcaccctagcctgtaatgtatctattgatctcagaaaactcctgtgcagGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGCTCCAGGCCAGTATCAACGCTCTGGGATCAACCGCCACTGTTCTCACAT
tattgat putative branch site (score: 681)
ctcctgt putative PPT
taatgtat TA-rich tract