1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtataatacccttatcacatatataagctaatataactcataagatgctgaaagcattctgaatgaaaggctgattctgggaactttgcctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCCAACTGGTTGACGTCCTTTGGAATAACAATGACAGCAAATTTGCTTCTGA
species | Zea mays |
transcript | GRMZM2G160430_T04 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCTTGGATCATAATGTCTGAG ATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCCEST: gi|37376279|gb|CF624650.1|CF624650
genomic: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATGTCTGAGgtataatacc ... ctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCC
EST: TGCCTTCTCCTTCGGTATGGGTTCCATTCC-TGGATCATAATGTTCTGAG ATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCEST: gi|37385615|gb|CF629958.1|CF629958
genomic: TGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATG-TCTGAGgtataatacc ... ctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGC
EST: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCTTGGATCATAATGTCTGAG ATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCC
genomic: CTGCCTTCTCCTTCGGTATGGGTTCCATTCCATGGATCATAATGTCTGAGgtataatacc ... ctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCC
atgctgaaagcattctgaatgaaaggctgattctgggaactttgcctattgacagATCCTTCCGGTTAGCATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCCAACTGGTTGACGTCCTTTGGAATAACAATGACAGCAAATTTGCTTCTGA
ggctgat putative branch site (score: 61)
ctttgcct putative PPT
aatgaaa TA-rich tract