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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtgtcacccttttcgaccattctaacatatcgttcattacaaagaaactctctcaccctgaaatcgtggataactctacatatatcatgtcttgtgtgttgatagcattgcaaggcttcctctatgcaaaattttgcctttctttactgcacctacactgatctatacccatgtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG

Basic information

species Zea mays
transcript GRMZM2G130230_T02
intron # 14
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 14
lower sequence: GLYMA16G06850.3 (Glycine max), 3'ss of exon 14
gtaagtgtcacccttttcgaccattctaacatatcgttcattacaaagaaactctctcaccctgaaatcgtggataactctacatatatcatgtcttgtgtgttgatagcattgcaaggcttcctctatgcaaaattttgcctttctttactgcacctacactgatctatacccatgtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
                                                                                 |||   ||   |   ||  || |  |  | | ||||    | || | ||  ||          | |    |  |     |  ||| |      |||||| |||||||| |||||||||||||| || |||||||||||||||||| |  ||
---------------------------------------------------------------------------------acaagaattg-gaactgcatgct--ttacttagcaatcagttctat-tgtcaagacaaatagatttgcgttaaataacaatggatattggaatatgttt-tgcagAATTAGAGGTGATCAGCAACATTTTGTTCGCAGAGATGAGTTGAAG

upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 14
lower sequence: GLYMA19G22690.1 (Glycine max), 3'ss of exon 14
gtaagtgtcaccctt---ttcgaccattctaacatatcgttcattacaaagaaactctctcaccctgaaatcgtggataactctacatatatcatgtcttgtgtgttgatagcattgcaaggcttcctctatgcaaaattttgcctttctttactgcacctacactgatctatacccatgtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
||| |   | |   |   |||  |  |  |    ||| | |  ||   |  ||||   |  | | | |  |  || |  | | ||||   ||  ||  ||   ||   ||  | | ||||    |  | | || |  |  | |    | || |  | |  |  | |||   ||     |  ||   |||||| ||||||||||| || || |||||||||||||||||| |  ||
gtatgctcctctaatgacttcatctttgattgtttatggcttttttgtagaaaacagac--atcttaaggtgttgaaagagtatacaagaatt-tggattacatg--aattacttagcaaacagttttgtttgaaggaaatag----ttttgaacgaatat-tattgagaaatggaatttgtttcacagAATTAGAGGTGATCAACAACATTTTGTTCGCAGAGATGAGTTGAAG

upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 14
lower sequence: GLYMA19G24250.1 (Glycine max), 3'ss of exon 14
gtaagtgtcacccttttcgaccattctaacatatcgttcattacaaagaaactctctcaccctgaaatcgtggataactctacatatatcatgtcttgtgtgttgatagcattgcaaggcttcctctatgcaaaattttgcctttctttactgcacctacactgatctatacccatgtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
                                                                           || |  |   ||  ||||  ||     ||   |  ||  ||    |||   | |   | |  |||  || | |    | |   ||| ||   |||    ||  || |||||||| | ||||||||||||||| |||||||||||||||||| |  ||
--------------------------------------------------------------------------gaattgga---attacatgcattac---ttagcattatc-catcagttctgttgtcagacaaattgatttgcat----gaaataacaatgga-tattggaattgttttgcagAATTAAAGGTGATCAGCAGCATTTTGTTCGCAGAGATGAGTTGAAG

upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 14
lower sequence: GLYMA16G06850.2 (Glycine max), 3'ss of exon 14
gtaagtgtcacccttttcgaccattctaacatatcgttcattacaaagaaactctctcaccctgaaatcgtggataactctacat-atatcatgtcttgtgtgttgata-gcattgcaaggcttcctctatgcaaaattttgcctttctttactgcacctacactgatctatacccatgtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
                 | |  |||  |||    | | | ||||  || ||     ||    ||  |      |||  | | | | | || |       | |    ||| |  |||||    |     |   ||  |   |   ||| ||  | |     |     |  ||    ||| |   |||    ||     |    ||  |  |||  ||| || |            
----------------acaagaattggaactg--catgctttacttagcaatcagttc-tattgtcaagacaaatagatttgcgttaaataacaatggatattggaatatgttttgcagAATTAGAGGTGATCAGCAACAT---TTTGTTCGCAGAGATGAGTTGAAGGTAAGATCAT-TACATGCTTGGTAGAGTATTGCAAGAGGGTCTTGCTTCACAAAC-----------

upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 14
lower sequence: Vv14s0171g00490.t01 (Vitis vinifera), 3'ss of exon 14
gtaagtgtcacccttttcgaccattctaacatatcgttcattacaaagaaactctctcaccctgaaatcgtggataactctacatatatcatgtcttgtgtgttgatagcattgcaaggcttcctctatgcaaaattttgcctttctttactgcacctacactgatctatacccatgtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
                                                                                      |||| ||   |       || |  |    || |     |  |   | ||   ||     | |       |  | | |||  |       || ||   ||| ||| |||||||||||||||| |||||||||||||||||| |  ||
-------------------------------------------------------------------------------------ctatcttgcacttaaaaaggaaaaaaaataaaagtagaataaacctagaaggatggggcacgtggaaat-caaatattgagatcgggttttggtttcacagGATACGAGGTGATCAGCAGCATTTTGTTCGCAGAGATGAGTTGAAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16922149|gb|BM075449.1|BM075449
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|17930351|gb|BM267311.1|BM267311
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18165893|gb|BM335732.1|BM335732
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|16922529|gb|BM075613.1|BM075613
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18167337|gb|BM337176.1|BM337176
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18168981|gb|BM338821.1|BM338821
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18164524|gb|BM334363.1|BM334363
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|16920887|gb|BM074878.1|BM074878
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|17932281|gb|BM269241.1|BM269241
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18162462|gb|BM332301.1|BM332301
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18164802|gb|BM334641.1|BM334641
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18171197|gb|BM341037.1|BM341037
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|17931985|gb|BM268945.1|BM268945
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18167754|gb|BM337594.1|BM337594
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18163685|gb|BM333524.1|BM333524
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|17931883|gb|BM268843.1|BM268843
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18165691|gb|BM335530.1|BM335530
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18172923|gb|BM348311.1|BM348311
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|211061229|gb|FL436762.1|FL436762
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|211061228|gb|FL436761.1|FL436761
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18168298|gb|BM338138.1|BM338138
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|28985370|gb|CB350607.1|CB350607
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18162240|gb|BM332079.1|BM332079
EST:     ACCAAAATGTCAAAATTCCTGAGGCATATAG-ACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: ACCAAAATGTCAAAATTCCTGAGGCATAT-GAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18162461|gb|BM332300.1|BM332300
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18172314|gb|BM347702.1|BM347702
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|211211964|gb|FL383461.1|FL383461
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18165995|gb|BM335834.1|BM335834
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18174512|gb|BM349900.1|BM349900
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18170459|gb|BM340299.1|BM340299
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|78021317|gb|DV489704.1|DV489704
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|7137854|gb|AW499303.1|AW499303
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|67037531|gb|CO464345.1|CO464345
EST:     ACCAAAATGTCAAAATTC-TGAGGCATATGAACGCCTTATCCTGGGATAC                         A-TA-GAGGTGATCAGCAGCACTTTGTTCGC
genomic: ACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGG-ATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGC
EST: gi|16917290|gb|BM073219.1|BM073219
EST:     TACCAAAGTGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|28986016|gb|CB350927.1|CB350927
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|17930593|gb|BM267553.1|BM267553
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|74237091|gb|DT645005.1|DT645005
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|16923080|gb|BM076072.1|BM076072
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18167519|gb|BM337358.1|BM337358
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|17930190|gb|BM267150.1|BM267150
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGATACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|40303860|gb|CK348247.1|CK348247
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18163622|gb|BM333461.1|BM333461
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|71757950|gb|DR955887.1|DR955887
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|6020578|gb|AW065611.1|AW065611
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|71449884|gb|DR830934.1|DR830934
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18175820|gb|BM350996.1|BM350996
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18166783|gb|BM336622.1|BM336622
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|211529383|gb|FL468953.1|FL468953
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|28986008|gb|CB350923.1|CB350923
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|32849799|gb|CD989480.1|CD989480
EST:     ACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: ACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18170373|gb|BM340213.1|BM340213
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18172047|gb|BM347435.1|BM347435
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18171848|gb|BM341688.1|BM341688
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18165503|gb|BM335342.1|BM335342
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|60357201|gb|DN224174.1|DN224174
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|78083438|gb|DV511831.1|DV511831
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|89757408|gb|DY687023.1|DY687023
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|16920409|gb|BM074643.1|BM074643
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18165971|gb|BM335810.1|BM335810
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18165599|gb|BM335438.1|BM335438
EST:     TACCAGAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18175462|gb|BM350778.1|BM350778
EST:     TACCAAAATGTCAAAATTCCTAAGGCATATAAACGCGTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|37389464|gb|CF631952.1|CF631952
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18163153|gb|BM332992.1|BM332992
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18163344|gb|BM333183.1|BM333183
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|211521491|gb|FL408970.1|FL408970
EST:     TTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18170152|gb|BM339992.1|BM339992
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18173363|gb|BM348751.1|BM348751
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18166460|gb|BM336299.1|BM336299
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|211255509|gb|FL452737.1|FL452737
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|14243764|gb|BG841395.2|BG841395
EST:     CCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: CCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18171055|gb|BM340895.1|BM340895
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18170269|gb|BM340109.1|BM340109
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18176129|gb|BM351195.1|BM351195
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|17930457|gb|BM267417.1|BM267417
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18174518|gb|BM349906.1|BM349906
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|4609528|gb|AI600367.1|AI600367
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|89759525|gb|DY688326.1|DY688326
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|16922740|gb|BM075732.1|BM075732
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18164763|gb|BM334602.1|BM334602
EST:     TACCAAAATGTCAAAATTCATGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18167594|gb|BM337434.1|BM337434
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18173628|gb|BM349016.1|BM349016
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|211153384|gb|FL395391.1|FL395391
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18163107|gb|BM332946.1|BM332946
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18171556|gb|BM341396.1|BM341396
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|17930752|gb|BM267712.1|BM267712
EST:     TACCAAAATGTCAAAATTCTTGAGGCATATGAACGCCTTATATTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|93283385|gb|EB675649.1|EB675649
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATTTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18164988|gb|BM334827.1|BM334827
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|86473854|gb|DY240224.1|DY240224
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|113701618|gb|EE679122.1|EE679122
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCTCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18174086|gb|BM349474.1|BM349474
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18170978|gb|BM340818.1|BM340818
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|16922705|gb|BM075697.1|BM075697
EST:     TACCAAAATGTCAAAGTTCATGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|16923088|gb|BM076080.1|BM076080
EST:     TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
EST: gi|18164021|gb|BM333860.1|BM333860
EST:     GACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATAC                         AATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
genomic: TACCAAAATGTCAAAATTCCTGAGGCATATGAACGCCTTATCTTGGATACgtaagtgtca ... gtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaaattttgcctttctttactgcacctacactgatctatacccatgtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG
                            cactgat  putative branch site (score: 3)
                                            tgtttct  putative PPT
           tttcttta  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaagtgtcacccttttcgaccattctaacatatcgttcattacaaagaaactctctcaccctgaaatcgtggataactctacatatatcatgtcttgtgtgttgatagcattgcaaggcttcctctatgcaaaattttgcctttctttactgcacctacactgatctatacccatgtttctgcagAATAAGAGGTGATCAGCAGCACTTTGTTCGCAGAGATGAGCTACAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG