1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtctgttgcgagtgaaataaattcgtaagttagttctttttcagacccccaaaacttaatgttctgttccttattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAGCATATGACACACGGAACATCTTCCAGTCACTCGATCTTGCATGGACAT
species | Zea mays |
transcript | GRMZM2G094497_T01 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|32929245|gb|CF034057.1|CF034057
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|5915388|gb|AW053029.1|AW053029
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTEST: gi|31352565|gb|CD436922.1|CD436922
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTT
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|33097071|gb|CF057031.1|CF057031
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTA CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|67020207|gb|CO448956.1|CO448956
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: CACTCTCTTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|211461529|gb|FL062011.1|FL062011
genomic: CACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|32928465|gb|CF033277.1|CF033277
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|60353112|gb|DN220085.1|DN220085
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|6342732|gb|AW165556.1|AW165556
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|5901377|gb|AW042477.1|AW042477
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGNAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|31352616|gb|CD436973.1|CD436973
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|32928932|gb|CF033744.1|CF033744
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGCCAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|67022236|gb|CO450985.1|CO450985
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|37386947|gb|CF630666.1|CF630666
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAG-TTGTGACACAAGGAEST: gi|211474169|gb|FL062077.1|FL062077
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAAGAAGTTTGTGACACAAGGAEST: gi|67040204|gb|CO466459.1|CO466459
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAANGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAAGAAGTTTGTGACACNAGGAEST: gi|4621630|gb|AI612463.1|AI612463
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAAAGGAGGCACTCTCGTCTGAGGATATG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|31352899|gb|CD437256.1|CD437256
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|32929097|gb|CF033909.1|CF033909
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|5804536|gb|AI979506.1|AI979506
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|32944174|gb|CF048993.1|CF048993
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGCTTGTGACACAAGGAEST: gi|24765944|gb|CA401102.1|CA401102
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: GGCCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|60353085|gb|DN220058.1|DN220058
genomic: GG-CCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|60358048|gb|DN225021.1|DN225021
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|32838699|gb|CD978380.1|CD978380
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|60345561|gb|DN212534.1|DN212534
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|6056572|gb|AW090977.1|AW090977
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|12968153|gb|BG265100.1|BG265100
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCCTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|33092363|gb|CF052357.1|CF052357
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|78026344|gb|DV494731.1|DV494731
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|32928990|gb|CF033802.1|CF033802
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|32944913|gb|CF049732.1|CF049732
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGCTTGTGACACAAGGAEST: gi|31352900|gb|CD437257.1|CD437257
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|31351441|gb|CD435798.1|CD435798
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|32856918|gb|CD996599.1|CD996599
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|32928322|gb|CF033134.1|CF033134
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|211466584|gb|FL062035.1|FL062035
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|5871234|gb|AW017705.1|AW017705
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|6012515|gb|AW061952.1|AW061952
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCCTGAAGGCTGTCGTTGGAGAGGAGGCNCTCTCGTTTGAGGATCTG CTTTACTTAGAGTTCCTTGCCAAGTTTGAGAGGAAGTTTGTGACCCAAGGAEST: gi|60357117|gb|DN224090.1|DN224090
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|24764051|gb|CA399220.1|CA399220
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|12968141|gb|BG265088.1|BG265088
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCCTGACAAGTTTGAGAGGAAGTTTGTGACCCAAGGAEST: gi|24934300|gb|CA452518.1|CA452518
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|33101328|gb|CF061288.1|CF061288
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|60349999|gb|DN216972.1|DN216972
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|13198402|gb|BG354303.1|BG354303
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|213171194|gb|FM184433.1|FM184433
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|7844600|gb|AW787822.1|AW787822
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACCCAAGGAEST: gi|211474172|gb|FL062080.1|FL062080
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|13490457|gb|BG517221.1|BG517221
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: GAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTGCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGEST: gi|60344123|gb|DN211096.1|DN211096
genomic: GAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTT-CCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGG
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|33100800|gb|CF060760.1|CF060760
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAEST: gi|12968122|gb|BG265069.1|BG265069
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAAAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACCCAAGGAEST: gi|60343460|gb|DN210433.1|DN210433
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
EST: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTG CTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
genomic: AGGCCATGAAGGCTGTCGTTGGAGAGGAGGCACTCTCGTCTGAGGATCTGgtctgttgcg ... tattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGA
aagttagttctttttcagacccccaaaacttaatgttctgttccttattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAGCATATGACACACGGAACATCTTCCAGTCACTCGATCTTGCATGGACAT
acttaat putative branch site (score: 1224)
ttctgttccttatt CT-rich tract
aaaacttaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtctgttgcgagtgaaataaattcgtaagttagttctttttcagacccccaaaacttaatgttctgttccttattgcacagCTTTACTTAGAGTTCCTTGACAAGTTTGAGAGGAAGTTTGTGACACAAGGAGCATATGACACACGGAACATCTTCCAGTCACTCGATCTTGCATGGACAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA