1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtaagttctttctcaaactgcagcacctaaagattacacaatataataagtcatattgattttcaagcctatattgcagacaagtaccaaacataaaaacattcctttccctgctacaacatgggtctgactgagaacaattattctctgtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGCACCTATCCAGGGAACCAAGCGCCCTTTCTGAACCTTCCAGCCCGAAGT
species | Zea mays |
transcript | GRMZM2G037342_T02 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: ATACTCAACAACCTAGCAATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTEST: gi|19058280|gb|BM736947.1|BM736947
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagG
EST: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|71759365|gb|DR957302.1|DR957302
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: TTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|76912609|gb|DV164817.1|DV164817
genomic: TTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|110481107|gb|EE010953.1|EE010953
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|50328970|gb|CO524096.1|CO524096
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: TCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|76931825|gb|DV172864.1|DV172864
genomic: TCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|76921050|gb|DV168432.1|DV168432
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|71426857|gb|DR807907.1|DR807907
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: TCAGCGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|38568958|gb|CF974843.1|CF974843
genomic: TCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: ATGCTATCATGATCACAAGCACAATCAGTGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|211218746|gb|FL457360.1|FL457360
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|20300776|gb|BQ163719.1|BQ163719
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|18964390|gb|BM660978.1|BM660978
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|7216796|gb|AW562918.1|AW562918
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: ATGCTATCATGATCACAAGCACAATCAGTGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCCCTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|149058821|gb|EE156842.2|EE156842
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGEST: gi|78119305|gb|DV537689.1|DV537689
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
EST: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATT GTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
genomic: ATGCTATCATGATCACAAGCACAATCAGCGTTGTTCTTTTCAGCACAATTgtaagttctt ... gtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGG
ctttccctgctacaacatgggtctgactgagaacaattattctctgtttatgcagGTCTTTGGGCTGCTGACGAAGCCACTGATCAGGCTCTTGATCCCGTCAAGGCACCTATCCAGGGAACCAAGCGCCCTTTCTGAACCTTCCAGCCCGAAGT
gtctgac putative branch site (score: 3)
ttctctgttt putative PPT
aacaattatt TA-rich tract