1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtattgtgaatttttctttcctggtcaactcaaatctaggcctctatggtgatgccgggctgtatccttgattccatctaccggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGGCACTTCCCTGAGCCAACACGTCTTTACATCAGTTCTCGAGTCCAAACA
species | Zea mays |
transcript | GRMZM2G093359_T01 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|211091998|gb|FL476411.1|FL476411
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|9028434|gb|BE238579.1|BE238579
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: AGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGC-AG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|60351022|gb|DN217995.1|DN217995
genomic: AGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|19058677|gb|BM737344.1|BM737344
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|16918483|gb|BM073768.1|BM073768
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|60338752|gb|DN205725.1|DN205725
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|60358733|gb|DN225706.1|DN225706
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|5499508|gb|AI855375.1|AI855375
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGGCGEST: gi|211167201|gb|FL456897.1|FL456897
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTTAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|22490645|gb|BU050568.1|BU050568
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|24769868|gb|CA404997.1|CA404997
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTTTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGCCCCTTGCACTGGGAAGGTCCTGCCGEST: gi|5740120|gb|AI947810.1|AI947810
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTCCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|94474487|gb|EB703445.1|EB703445
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|87154062|gb|DY398851.1|DY398851
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|71424524|gb|DR806343.1|DR806343
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|8516666|gb|BE123391.1|BE123391
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTTTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACACCATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|149008950|gb|EE153723.2|EE153723
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|5686716|gb|AI939809.1|AI939809
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|89252602|gb|DY624388.1|DY624388
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTTTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|60397238|gb|DN230054.1|DN230054
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|5740098|gb|AI947788.1|AI947788
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|149106512|gb|EE188404.2|EE188404
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|149090119|gb|EE179417.2|EE179417
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTTTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGEST: gi|86466217|gb|DY232590.1|DY232590
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
EST: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAG GGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
genomic: GCAAGTTTCTAGAAGATGGAGATGAGGTCATCTTGACAGGATGCTGCAAGgtattgtgaa ... ggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCG
aggcctctatggtgatgccgggctgtatccttgattccatctaccggttcttcagGGTGAAGGCTACAACATTGGTTTTGGAACTTGCACTGGGAAGGTCCTGCCGGCACTTCCCTGAGCCAACACGTCTTTACATCAGTTCTCGAGTCCAAACA
ccttgat putative branch site (score: 121)
ttcttc putative PPT