1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtgaatttcttctgcctttgcgaatccccctcaaagtatatagaggaagaatcctgtattgtgcaatacagtataacaagcaccgcgtccgtgtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAACCGTTCGTTAGCACCTATCCGGCAGGTGAATTTCTTCTGACGGAGACAG
species | Zea mays |
transcript | GRMZM2G045241_T07 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAAEST: gi|5871498|gb|AW017969.1|AW017969
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAA
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTNCTGGCTCTCCGTTTCTTGCAGTCGAACCTGTTGGAGEST: gi|47961462|gb|CN844171.1|CN844171
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTT-CTGGCTCTCCG-TTCTTGCAGTCGAACCTGTTGGAG
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAAEST: gi|78081455|gb|DV509867.1|DV509867
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAA
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAAEST: gi|211252583|gb|FL430692.1|FL430692
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAA
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAAEST: gi|76908596|gb|DV163020.1|DV163020
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAA
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAAEST: gi|211489896|gb|FL473954.1|FL473954
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAA
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAAEST: gi|15080211|gb|BI388982.1|BI388982
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAA
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAAEST: gi|211489897|gb|FL473955.1|FL473955
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAA
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAAEST: gi|78117446|gb|DV535833.1|DV535833
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAA
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAAEST: gi|211260967|gb|FL474891.1|FL474891
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAA
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAAEST: gi|166572824|gb|EG235097.1|EG235097
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAA
EST: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAG CCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCG
genomic: GGTGATGTTCCGGCCATACCATCCTGGCAGCAGGCGTACATGGTTGACAGgtgaatttct ... gtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCG
agaatcctgtattgtgcaatacagtataacaagcaccgcgtccgtgtgtctgcagCCAAGGCGCATTTTCTGGCTCTCCGTTCTTGCAGTCGAACCTGTTGGAGAACCGTTCGTTAGCACCTATCCGGCAGGTGAATTTCTTCTGACGGAGACAG
gtataac putative branch site (score: 3)
tataacaa TA-rich tract