1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtatgtttacttatacttcagttagcatgtattaatggaactccaaagagctgctttgttatctcttgctattgtggtaacactgattgttgtctttaaacaatgatagaatgttgcaaggtttatctgactttgttttgttttgcatctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATTTAGGGTACTAGATTGCGTTGCCTCAGGGCTAGTTTGGCCACCTCATTT
species | Zea mays |
transcript | GRMZM2G028096_T03 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|17929919|gb|BM266879.1|BM266879
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|31998127|gb|CD661940.1|CD661940
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18163534|gb|BM333373.1|BM333373
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|9953649|gb|BE640232.1|BE640232
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|4646743|gb|AI621818.1|AI621818
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|71764555|gb|DR962492.1|DR962492
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|211378389|gb|FL229419.1|FL229419
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: ATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|60357771|gb|DN224744.1|DN224744
genomic: ATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18174490|gb|BM349878.1|BM349878
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|17931777|gb|BM268737.1|BM268737
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|78023870|gb|DV492257.1|DV492257
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTTTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|74232159|gb|DT640073.1|DT640073
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18167439|gb|BM337278.1|BM337278
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18175669|gb|BM350898.1|BM350898
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18167334|gb|BM337173.1|BM337173
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|6021894|gb|AW066822.1|AW066822
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18166248|gb|BM336087.1|BM336087
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18164732|gb|BM334571.1|BM334571
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|16921243|gb|BM075055.1|BM075055
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18167102|gb|BM336941.1|BM336941
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18172104|gb|BM347492.1|BM347492
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|16921430|gb|BM075145.1|BM075145
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18162156|gb|BM331995.1|BM331995
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|17931415|gb|BM268375.1|BM268375
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18168036|gb|BM337876.1|BM337876
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|166703828|gb|EG203567.1|EG203567
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: GGTCATATTCACCAAGGGGAAGTTCAAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|5566994|gb|AI881905.1|AI881905
genomic: GGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18165701|gb|BM335540.1|BM335540
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18166694|gb|BM336533.1|BM336533
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18163210|gb|BM333049.1|BM333049
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|17932280|gb|BM269240.1|BM269240
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|5499217|gb|AI855084.1|AI855084
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18170063|gb|BM339903.1|BM339903
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|29545137|gb|CB605315.1|CB605315
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18171731|gb|BM341571.1|BM341571
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18169111|gb|BM338951.1|BM338951
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|16921280|gb|BM075073.1|BM075073
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|17932384|gb|BM269344.1|BM269344
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|18175096|gb|BM350484.1|BM350484
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|28985625|gb|CB350734.1|CB350734
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATEST: gi|211378356|gb|FL454976.1|FL454976
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
EST: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGG GCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
genomic: CGCAGGTCATATTCACCAAGGGGAAGTTCTAGGGATTATGATCGATCTGGgtatgtttac ... ctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAAT
tgatagaatgttgcaaggtttatctgactttgttttgttttgcatctttctgcagGCGTCATGAACGCCGTGATCGGTACTAGGAGCAAGGAAGCCTCCTTGAAATTTAGGGTACTAGATTGCGTTGCCTCAGGGCTAGTTTGGCCACCTCATTT
atctgac putative branch site (score: 3)
ttttgcatctttct putative PPT
ttttgtttt TA-rich tract