Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...actgcaacttaaatttaagaacggccagctactggatttgaactaagacttctttacattttattttctggtcctgataatcaatccatctcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCATTGAAGACTGCGTGAGGGCAGGTTGCTATGCCGCAAACGTTATCATCCA

Basic information

species Zea mays
transcript GRMZM2G540538_T01
intron # 12
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G540538_T02 (Zea mays), 3'ss of exon 9
lower sequence: LOC_Os02g41590.1 (Oryza sativa), 3'ss of exon 12
actgcaacttaaatttaagaacggccagctactggatttgaacta-agacttctttacattttattttctggtcctgataatcaatccatc--tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCATTGAAGACTGCGTGAGGGCAGGTTGCTATGCCGCAAACGTTATCATCCA
   |    ||||     |        | ||   |    ||    | |   | || | |||||| | | ||| ||||||||| | | ||  |  |   |  |||||||||| || |||||||||||||||||||| ||||||| |   ||| ||||||| ||||  |||| ||| ||||||||||||||||| |||||||||||
---gatgtttaagaaacaagttaataaactctggaggctgtctgataagttcctattcattttgtctactgttcctgataagctaccctccctttattcttagGTGATGCCTTTGTTGGAGGCTTCCTCTCACAATTGGTTCAACAAAAGAGCATTGAGGACTCTGTGAAGGCTGGTTGCTATGCCGCAAATGTTATCATCCA

upper sequence: GRMZM2G540538_T02 (Zea mays), 3'ss of exon 9
lower sequence: GLYMA03G33910.2 (Glycine max), 3'ss of exon 10
------actgcaacttaaatttaagaacggccagctactggatttgaactaagacttctttacattttattttctggtcctgataatcaatccatctcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCATTGAAGACTGCGTGAGGGCAGGTTGCTATGCCGCAAACGTTATCATCCA
          || |    ||||   ||     ||  | |||   |||   |||     |    ||||| |||  || | |   |  | | |   |   | || |||| ||||| || || ||||| || || || || |||||||  |  |||  ||||||||| |||||||| || || || ||||| |||||||||||||||||
tactgaggcacagccaggatttcgtaaa---tagacattggtagtga--caagcaagatgccaattttgtttcatgattc-attccttattgttttatgtttgtagGAGATGCATTTGTCGGAGGATTTCTTTCTCAATTGGTTCAGGAGAAGCCCATTGAAGAGTGCGTGAGAGCTGGCTGTTATGCAGCAAACGTTATCATCCA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211425414|gb|FL239287.1|FL239287
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|8103232|gb|AW927885.1|AW927885
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|14243872|gb|BG841640.2|BG841640
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|22819672|gb|BU499762.1|BU499762
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|6127248|gb|AW129894.1|AW129894
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACNCCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60340036|gb|DN207009.1|DN207009
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60355025|gb|DN221998.1|DN221998
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60340909|gb|DN207882.1|DN207882
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|5124358|gb|AI746094.1|AI746094
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACCCCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCCCAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|211153135|gb|FL380305.1|FL380305
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|111433446|gb|EE297763.1|EE297763
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|5777282|gb|AI974901.1|AI974901
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCCCAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|78026829|gb|DV495216.1|DV495216
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32827502|gb|CD967180.1|CD967180
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|37394781|gb|CF634667.1|CF634667
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|213188693|gb|FM194104.1|FM194104
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60349992|gb|DN216965.1|DN216965
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32827435|gb|CD967113.1|CD967113
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|4753499|gb|AI657409.1|AI657409
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60359018|gb|DN225991.1|DN225991
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|71307111|gb|DR789728.1|DR789728
EST:     GTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: GTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|211542261|gb|FL396321.1|FL396321
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTYCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|211019335|gb|FL371822.1|FL371822
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTG
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTG
EST: gi|37396080|gb|CF635327.1|CF635327
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|5055786|gb|AI734673.1|AI734673
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|22552564|gb|BU102403.1|BU102403
EST:     CCCTGTGATCCTATTGCCCCAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCCTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|16917923|gb|BM073496.1|BM073496
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|67022254|gb|CO451003.1|CO451003
EST:     TGTGATCCTATTGCCCCAAGGAGAAAGCT-GTTGACACCAACGGGCGCAG                         -TGATGCTTTCGTTGGAGGCTTCCT
genomic: TGTGATCCTATTGCCC-AAGGAGAA-GCTTGTTGACACCAACGG-CGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCT
EST: gi|37397822|gb|CF636219.1|CF636219
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60354205|gb|DN221178.1|DN221178
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60354850|gb|DN221823.1|DN221823
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|30031918|gb|CB833769.1|CB833769
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|9254720|gb|BE345188.1|BE345188
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|44900639|gb|CK827184.1|CK827184
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|213172071|gb|FM185941.1|FM185941
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|67023080|gb|CO451829.1|CO451829
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|6526832|gb|AW216101.1|AW216101
EST:     CCCTGTGATCCTATTGGCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|5058596|gb|AI737072.1|AI737072
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|37396984|gb|CF635786.1|CF635786
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|9953131|gb|BE639714.1|BE639714
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|30032092|gb|CB833943.1|CB833943
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|37376461|gb|CF624762.1|CF624762
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32827469|gb|CD967147.1|CD967147
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32824785|gb|CD964507.1|CD964507
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|40336443|gb|CK370513.1|CK370513
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32804604|gb|CD956840.1|CD956840
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60340637|gb|DN207610.1|DN207610
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTTTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|903271|gb|H35874.1|H35874
EST:     CTTGTTGACACCAACGGCGCAN                         GTGATGCTTTCGTTGGAAGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|6539073|gb|AW225212.1|AW225212
EST:     GTGATCCTATTGGCCCCCAAGGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: GTGATCCTATT-G--CCCAA-GGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60348247|gb|DN215220.1|DN215220
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|211408680|gb|FK964275.1|FK964275
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTSTTGACACCAACGGCGCAG                         STGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|71768279|gb|DR966216.1|DR966216
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|4827516|gb|AI668208.1|AI668208
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|22542193|gb|BU092631.1|BU092631
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|37400560|gb|CF637635.1|CF637635
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60339525|gb|DN206498.1|DN206498
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|19058768|gb|BM737435.1|BM737435
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|13557953|gb|BG549309.1|BG549309
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|13150078|gb|BG320400.1|BG320400
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|29543822|gb|CB604202.1|CB604202
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|16919071|gb|BM074026.1|BM074026
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60356286|gb|DN223259.1|DN223259
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|166687331|gb|EG306513.1|EG306513
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTC
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTC
EST: gi|4775943|gb|AI664946.1|AI664946
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60338916|gb|DN205889.1|DN205889
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|211364818|gb|FL445544.1|FL445544
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|37393343|gb|CF633934.1|CF633934
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|211505041|gb|FL430356.1|FL430356
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32945308|gb|CF050127.1|CF050127
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTAAAACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|67019838|gb|CO448587.1|CO448587
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|40303855|gb|CK348242.1|CK348242
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|5468771|gb|AI834562.1|AI834562
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTTTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|37380764|gb|CF627215.1|CF627215
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCATCGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|78543928|gb|DV621426.1|DV621426
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|37395323|gb|CF634941.1|CF634941
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|40302765|gb|CK347152.1|CK347152
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|19058769|gb|BM737436.1|BM737436
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32827418|gb|CD967096.1|CD967096
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|18177669|gb|BM378879.1|BM378879
EST:     CAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|211425411|gb|FL239284.1|FL239284
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|4967056|gb|AI691813.1|AI691813
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32868038|gb|CF007720.1|CF007720
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|5901147|gb|AW042247.1|AW042247
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAN                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|37385823|gb|CF630073.1|CF630073
EST:     CACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32857559|gb|CD997240.1|CD997240
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACGGTTGGTTCTAGGCAAGGGTA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60359004|gb|DN225977.1|DN225977
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32792260|gb|CD944496.1|CD944496
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32868039|gb|CF007721.1|CF007721
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|22490646|gb|BU050569.1|BU050569
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|37382673|gb|CF628297.1|CF628297
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|60349736|gb|DN216709.1|DN216709
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|67028036|gb|CO456785.1|CO456785
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGGAG-CTTCCTCTCACAGTTGGTTCTAGGCAAGGGC
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGG-AGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGC
EST: gi|211425410|gb|FL239283.1|FL239283
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32809835|gb|CD962069.1|CD962069
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|67024355|gb|CO453104.1|CO453104
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|67039373|gb|CO465628.1|CO465628
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|37400718|gb|CF637717.1|CF637717
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|33091476|gb|CF051470.1|CF051470
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|67010622|gb|CO439371.1|CO439371
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|211425416|gb|FL239289.1|FL239289
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|32827594|gb|CD967272.1|CD967272
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: gi|50330531|gb|CO525657.1|CO525657
EST:     CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAG                         GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: CCCTGTGATCCTATTGCCCAAGGAGAAGCTTGTTGACACCAACGGCGCAGgtacacactt ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agacttctttacattttattttctggtcctgataatcaatccatctcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCATTGAAGACTGCGTGAGGGCAGGTTGCTATGCCGCAAACGTTATCATCCA
                          tcctgat  putative branch site (score: 3)
                                       tccatctcgcttct  putative PPT
     tctttacattttattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
actgcaacttaaatttaagaacggccagctactggatttgaactaagacttctttacattttattttctggtcctgataatcaatccatctcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCATTGAAGACTGCGTGAGGGCAGGTTGCTATGCCGCAAACGTTATCATCCA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA