1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
...aaaaggatggattatgctaccttttgccctcattgtgaatacgtgttaattgactggttaatgtttgatctaatgttgagtgtgtattctatccatgcagACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCAATTGACCTCATCTCA
species | Zea mays |
transcript | GRMZM2G178822_T03 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: GGCCTCAAGGATTGTCTCTTGCAGAAGCAATGAAGTATCAGTTCCCACAG ACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCAEST: gi|31361016|gb|CD445373.1|CD445373
genomic: GGCCTCAAGGATTGTCTCTTGCAGAAGCAATGAAGTATCAGTTCCCACAGgtcaatattc ... atccatgcagACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCA
EST: GGCCTCAAGGATTGTCTCTTGCAGAAGCAATGAAGTATCAGTTCCCACAG ACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCAEST: gi|67015254|gb|CO444003.1|CO444003
genomic: GGCCTCAAGGATTGTCTCTTGCAGAAGCAATGAAGTATCAGTTCCCACAGgtcaatattc ... atccatgcagACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCA
EST: GGCCTCAAGGATTGTCTCTTGCAGAAGCAATGAAGTATCAGTTCCCACAG ACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCAEST: gi|60352824|gb|DN219797.1|DN219797
genomic: GGCCTCAAGGATTGTCTCTTGCAGAAGCAATGAAGTATCAGTTCCCACAGgtcaatattc ... atccatgcagACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCA
EST: GGCCTCAAGGATTGTCTCTTGCAGAAGCAATGAAGTATCAGTTCCCACAG ACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCAEST: gi|211493408|gb|FL041695.1|FL041695
genomic: GGCCTCAAGGATTGTCTCTTGCAGAAGCAATGAAGTATCAGTTCCCACAGgtcaatattc ... atccatgcagACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCA
EST: GGCCTCAAGGATTGTCTCTTGCAGAAGCAATGAAGTATCAGTTCCCACAG ACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCM
genomic: GGCCTCAAGGATTGTCTCTTGCAGAAGCAATGAAGTATCAGTTCCCACAGgtcaatattc ... atccatgcagACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCA
ttaattgactggttaatgtttgatctaatgttgagtgtgtattctatccatgcagACCAAAGGCAGTCAATTGTCTGAGGTGATGACAACAGCTAGTAGCGAGGCAATTGACCTCATCTCA
atctaat putative branch site (score: 3)
ttctatcc putative PPT
ttaatgttt TA-rich tract