1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gttagcaccgccactacaagttcatgaatgagcaaacttctgacgaattagtgatactcccagtttcctttcactggtagactgactaaacactatcctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCATAGCACTTGTGATGAGCATCGCAACGATGGTCCGTCTGACCCGCAGCAT
species | Zea mays |
transcript | GRMZM2G162461_T01 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: CTGCAAGAGCCAGGGAACACCACCAGATGAGAAGATTGCCATCACCAAAG CTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCAEST: gi|6918395|gb|AW399925.1|AW399925
genomic: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccg ... cctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
EST: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAG CTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCAEST: gi|32870498|gb|CF010180.1|CF010180
genomic: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccg ... cctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
EST: CTGCAAGAGCCAGGGAACACCACCAGATGAGAAGATTGCCATCACCAAAG CTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCAEST: gi|21391040|gb|BQ529089.1|BQ529089
genomic: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccg ... cctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
EST: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAG CTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCAEST: gi|21390421|gb|BQ528470.1|BQ528470
genomic: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccg ... cctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
EST: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAG CTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
genomic: CTGCAAGAGCCACGGAACACCACCAGATGAGAAGATTGCCATCACCAAAGgttagcaccg ... cctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCA
tgatactcccagtttcctttcactggtagactgactaaacactatcctttatcagCTATTATAAATGTATCGAATGGATCCAAGCCCCCACTCTTTGCTGGCATCATAGCACTTGTGATGAGCATCGCAACGATGGTCCGTCTGACCCGCAGCAT
gactaaa putative branch site (score: 187)
ctatccttt putative PPT
tttatca TA-rich tract