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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgatattttgtcatagaatgtttgtatactttattcttaattttgcaaattcttaatattagctctcccgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAGTTGCTGACTTCTTCGATGCAGCAGTGAATCTGGCCTTGAAGATTAAGGC

Basic information

species Zea mays
transcript GRMZM2G135283_T02
intron # 12
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G135283_T02 (Zea mays), 3'ss of exon 12
lower sequence: LOC_Os03g52840.3 (Oryza sativa), 3'ss of exon 10
gtacgatattttgtcata-gaatgtttgtatactttattcttaat---tttgcaaattcttaatattagctctcccgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAGTTGCTGACTTCTTCGATGCAGCAGTGAATCTGGCCTTGAAGATTAAGGC
|||  || |      ||  |  | ||| | || |||| |   |||   |||||||| ||| ||||| |||||     |||||||||||||||||| || || || |||||||||||||| || || || ||||| |||||||| ||||||||||||||||||||  |||| |||||| |||||||
gtaaaatctgcccctatgtggttttttttttaatttacttaaaatagatttgcaaaatctcaatatcagctccatgatcatgcagGAACCCCAGCACTGACCTCAAGAGGATTTGTTGAGGAGGACTTTGCTAAGGTTGCTGATTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGC

upper sequence: GRMZM2G135283_T02 (Zea mays), 3'ss of exon 12
lower sequence: GLYMA02G38160.2 (Glycine max), 3'ss of exon 13
gtacgatattttgtcatagaatgtttgtatactttattcttaattttgcaaattc---ttaatattagctctcccgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAGTTGCTGACTTCTTCGATGCAGCAGTGAATCTGGCCTTGAAGATTAAGGC
||||  | | |||   |    | ||| ||| |||  ||  |   | |  || | |   |||||      |  |  || || |||||||||| || || || || || ||||||||||| ||||||||||  ||||| ||||| | ||| |||||||| || ||  | |||||| ||||||||| 
gtacagtctgttgc--tcatctttttttatgctt-gttagtggatctataattacatgttaatgaagattaacttgtgattcagGAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTCGAAAAAGTAGCTGAATACTTTGATGCAGCTGTCAAGTTAGCCTTGCAGATTAAGGA

upper sequence: GRMZM2G135283_T02 (Zea mays), 3'ss of exon 12
lower sequence: GLYMA18G27710.1 (Glycine max), 3'ss of exon 14
gtacgatattttgtcatagaatgtttgtatactttattcttaattttgcaaattcttaatattagctctcccgtc--atgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAGTTGCTGACTTCTTCGATGCAGCAGTGAATCTGGCCTTGAAGATTAAGGC
|||| |  | ||         || || |||  | || | || || ||  || |   | | || |  ||||  ||   || |||||||||| || ||||| || |||||||||||||| || ||||| | ||| || || || ||||| ||||||||||||||  ||||  |||||||||||| 
gtacaagctctttgt------tgcttctat--tataatttttatgttttaattcacttacatgatttctcttgtggaattcagGAACCCCTGCTCTTACTTCTAGAGGATTTGTTGAGGAGGATTTTGTTAAGGTAGCAGAGTTCTTTGATGCAGCAGTGAAGTTGGCTGTGAAGATTAAGGG

upper sequence: GRMZM2G135283_T02 (Zea mays), 3'ss of exon 12
lower sequence: Vv00s0211g00090.t01 (Vitis vinifera), 3'ss of exon 5
gtacgatattttgtcatagaatgtttgtatactttattcttaattttgcaaattcttaatattagctctcccgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAGTTGCTGACTTCTTCGATGCAGCAGTGAATCTGGCCTTGAAGATTAAGGC
|||   | |||  | ||   ||| | |  |   | ||| ||| |||      | ||| |  |  ||||||  ||  | |||||||||| || ||||| || ||||||||||||||||| ||||| | |||||| || || | ||| || |  || ||||   ||||  ||||||| |||||
gtagagtttttgttgatcacatggt-gcttgtgtgatttttattttaagttttacttga--tccgctctcttgt--ttcagGAACCCCTGCTCTTACTTCTAGAGGATTTGTTGAAGAGGATTTTGTTAAAGTAGCAGAATACTTTGACGTTGCTGTGACCGTGGCAGTGAAGATCAAGGC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71299009|gb|DR785497.1|DR785497
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|108953686|gb|EC364842.1|EC364842
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|6449712|gb|AW181252.1|AW181252
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|67017024|gb|CO445773.1|CO445773
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|37391313|gb|CF632898.1|CF632898
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|113703934|gb|EE681438.1|EE681438
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|148945830|gb|EC891119.2|EC891119
EST:     CACAGTTCCTGGTGATGTTTCAGTTATGGTGCCAGGGGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|60353152|gb|DN220125.1|DN220125
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|5804699|gb|AI979669.1|AI979669
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|6194529|gb|AW146633.1|AW146633
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|148928192|gb|EE284698.2|EE284698
EST:     CACAGTTCCTGGTGATGTTTCAGTTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|148973318|gb|EE024403.2|EE024403
EST:     CACAGTTCCTGGTGATGTTTCAGTTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|60397906|gb|DN230722.1|DN230722
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|40336482|gb|CK370552.1|CK370552
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|148958251|gb|EC904465.2|EC904465
EST:     CACAGTTCCTGGTGATGTTTCAGTTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|5915216|gb|AW052857.1|AW052857
EST:     CNCAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|6102053|gb|AW126523.1|AW126523
EST:     CAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGNNCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGG--CATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|149089956|gb|EE179245.2|EE179245
EST:     CACAGTTCCTGGTGATGTTTCAGTTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|60344488|gb|DN211461.1|DN211461
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|60343439|gb|DN210412.1|DN210412
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|37393418|gb|CF633973.1|CF633973
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|60357206|gb|DN224179.1|DN224179
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|89249961|gb|DY621747.1|DY621747
EST:     CACAGTTCCTGGTGATGTTTCAGTTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|211373639|gb|FL261168.1|FL261168
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAA-CCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|60352787|gb|DN219760.1|DN219760
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|113700941|gb|EE678445.1|EE678445
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|67013913|gb|CO442662.1|CO442662
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAG-ATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|60349820|gb|DN216793.1|DN216793
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGA
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGA
EST: gi|14204327|gb|BG838004.1|BG838004
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|32850232|gb|CD989913.1|CD989913
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|60354435|gb|DN221408.1|DN221408
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGG                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
EST: gi|211502770|gb|FL432440.1|FL432440
EST:     CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGAT-G                         GAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG
genomic: CACAGTTCCTGGTGATGTTTCAGCTATGGTGCCAGGAGGCATCAGGATGGgtacgatatt ... cgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtatactttattcttaattttgcaaattcttaatattagctctcccgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAGTTGCTGACTTCTTCGATGCAGCAGTGAATCTGGCCTTGAAGATTAAGGC
                           tcttaat  putative branch site (score: 3)
                                       ctctcccgtc  putative PPT
      tttattcttaattttg  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtacgatattttgtcatagaatgtttgtatactttattcttaattttgcaaattcttaatattagctctcccgtcatgcagGAACCCCAGCCCTTACGTCGAGAGGATTTGTTGAAGAAGATTTCGCTAAAGTTGCTGACTTCTTCGATGCAGCAGTGAATCTGGCCTTGAAGATTAAGGC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA