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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...aacgaatattttatattggtttattatgttgctctgttatgtctgaataagaattagatatcctggtatttgaactaaatataaatataacctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAGCCATGTACATGAAACTAACT

Basic information

species Zea mays
transcript GRMZM2G130230_T02
intron # 12
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 12
lower sequence: LOC_Os04g40874.1 (Oryza sativa), 3'ss of exon 11
--aacgaatattttatattggtttattatgttgctctgttatgtct-gaataagaattagatat---cctggtatttgaactaaatataaatataacctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAGCCATGTACATGAAACTAACT
    |  |||  || | ||  ||| || | |   | |||| | | | | ||   ||||  || |    ||   |||||||||||| | |       |||| |||||| || | ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||
aatgcagatacctttttttccttttttctatcagtatgttcttttttgtatcttaattgcatgtgggtctaacatttgaactaaacacat------cctggtgaagGTAAAAGGCAAGGAAGAAATGAGTTTGTCATACGCCTTCAGCCATCAGAAGCCATGTACATGAAACTTACT

upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 12
lower sequence: GLYMA19G22690.1 (Glycine max), 3'ss of exon 12
-aacgaatattttatattggtttattatgttgctctgttatgtctgaataagaattagatatc--ctggtatttgaac-taaatataaatataacctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAGCCATGTACATGAAACTAACT
 |     ||   | ||| | ||  |||| ||| |  |  | ||    || | |  || |||||  ||  | ||| ||| | | | ||||  ||  |   |  |||  | ||||| || ||||||||||||||||||||||| ||||| |||||||| ||||||||||| || || 
tattagctagagtgtat-gtttccttatcttgat--ggcaagtgcctatta-atctaaatatcaacttatgtttaaaccttactgtaaacttattcctgtttagGTCAAAAGCAGGGGAGAAATGAGTTTGTTATACGCCTGCAACCTTCAGAAGCTATGTACATGAAGCTTACA

upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 12
lower sequence: GLYMA19G24250.1 (Glycine max), 3'ss of exon 12
aacgaatattttatattggtttattatgttgctctgttatgtctgaataagaattagat-atcctggtatttgaactaaatataaatataacctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAGCCATGTACATGAAACTAACT
 || || | || | ||   | |    | | ||  | ||   |     | |  |  | || |   | | ||   || ||| | | ||| | | |   |  ||| || ||||| || ||||||||||||||||| ||||| ||||| | |||||| ||||||||||| || || 
taccaacaattaacatcaatattagctatagccttttttctttgttgtcatcaaaatatcagtttagcata-aaagtaactcttaattttaacatttttagGTAAAAAGCAGGGGAGAAATGAGTTTGTTATCCGCCTACAACCTTTAGAAGCTATGTACATGAAGCTTACG

upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 12
lower sequence: AT5G40760.1 (Arabidopsis thaliana), 3'ss of exon 12
-----------aacgaatattttatattggtttattatgttgctctgttatgtctgaataagaattagatatcctggtatttgaactaaatataaatataacctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAGCCATGTACATGAAACTAACT
             |  | ||  | | |||  |  |  | | ||| | ||   | | ||||    | |     |   ||||     ||   | ||||  |  | ||    |||  | ||||||||||| || |||||||| |||||| | ||||| ||||| || ||||||||||||||||||
gtattgtcttgccctgacatcgtgttttgaatcttcttttagcttt-ttgaatttaaatatatgtaaagacacaatgtatc---gctttgtctaaac-tctcttgcaacagGTCAAAAGCAAGGAAGGAACGAGTTTGTGATACGCTTGCAACCTTCAGAGGCAATGTACATGAAACTAACT

upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 12
lower sequence: AT3G27300.2 (Arabidopsis thaliana), 3'ss of exon 13
aacgaatattttatattggtttattatgttgctctgttatgtctgaataagaattagatatcctggtatttgaactaaatataaatataacctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAGCCATGTACATGAAACTAACT
                  |||| |   |   |    | |   ||    ||  | | || ||   |    |||  ||||      ||  ||    |   |||  | || ||||| || || ||||||||||||||| | || || ||||| |||||||||||||| ||||||
------------------gtttgtatcgagaccaaatcaaaccttcccaaatacttgaaatttgg----ttggtctaacctctcatgcaatgcaac--agGTCAAAACCAAGGGAGGAACGAGTTTGTTATACGCTTGCAGCCTTCAGAGGCCATGTACATGAAGCTAACT

upper sequence: GRMZM2G130230_T02 (Zea mays), 3'ss of exon 12
lower sequence: Vv14s0171g00490.t01 (Vitis vinifera), 3'ss of exon 12
-aacgaatattttatattggtttattatgttgctctgttatgtctgaataagaattagatatcctggtatttgaactaaatataaatataacctg-atgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAGCCATGTACATGAAACTAACT
 |   | |  ||||         |||   |    | |  || | | ||| | | |  | |    |  ||||| |   | ||  | ||     |||  |  |||  | | ||| || |||||||| ||||| |||||||||||||| | ||| ||||| |||||||| || || 
tattaactgctttagtcataaacattggttcaagcagagatctttaaatcaaatt--gttgctttaatattttattaatattcagatggtttctgtgtttagGTCAAAGGCAGGGGAGAAATGAATTTGTAATACGCCTCCAACCTTTAGAGGCCATTTACATGAAGCTTACG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16922149|gb|BM075449.1|BM075449
EST:     AGCAGGAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGCAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|17930351|gb|BM267311.1|BM267311
EST:     CTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: CTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18165893|gb|BM335732.1|BM335732
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|16922529|gb|BM075613.1|BM075613
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18167337|gb|BM337176.1|BM337176
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18168981|gb|BM338821.1|BM338821
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18164524|gb|BM334363.1|BM334363
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|16920887|gb|BM074878.1|BM074878
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|211002848|gb|FL384087.1|FL384087
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCNAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18162462|gb|BM332301.1|BM332301
EST:     CATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: CATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18164802|gb|BM334641.1|BM334641
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18171197|gb|BM341037.1|BM341037
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18167754|gb|BM337594.1|BM337594
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18163685|gb|BM333524.1|BM333524
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|17931883|gb|BM268843.1|BM268843
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18165691|gb|BM335530.1|BM335530
EST:     GTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: GTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18172923|gb|BM348311.1|BM348311
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18168298|gb|BM338138.1|BM338138
EST:     GTGACATTTTTAGAA                         GCAAGAAGCAAGAAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: GTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|28985370|gb|CB350607.1|CB350607
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18162461|gb|BM332300.1|BM332300
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18172314|gb|BM347702.1|BM347702
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18165995|gb|BM335834.1|BM335834
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|211483716|gb|FL115161.1|FL115161
EST:     AGCAGAAGTTCGGGTGCWATTCAAGGATGTTCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAG
EST: gi|18174512|gb|BM349900.1|BM349900
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|78021317|gb|DV489704.1|DV489704
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTTCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|67037531|gb|CO464345.1|CO464345
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTTCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|28986016|gb|CB350927.1|CB350927
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|17930593|gb|BM267553.1|BM267553
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|74237091|gb|DT645005.1|DT645005
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|16923080|gb|BM076072.1|BM076072
EST:     AGCAGAAGGTCGGGTGCAATTCAAGAATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGGAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18167519|gb|BM337358.1|BM337358
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|17930190|gb|BM267150.1|BM267150
EST:     AAGTTCGGGTGCAATTCAAGGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AAGTTCGGGTGCAATTCAA-GGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|40303860|gb|CK348247.1|CK348247
EST:     ATTCAAGGATGTTCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: ATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18163622|gb|BM333461.1|BM333461
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|71757950|gb|DR955887.1|DR955887
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|6020578|gb|AW065611.1|AW065611
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTTCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|71449884|gb|DR830934.1|DR830934
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18175820|gb|BM350996.1|BM350996
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18166783|gb|BM336622.1|BM336622
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|211529383|gb|FL468953.1|FL468953
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTTCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|28986008|gb|CB350923.1|CB350923
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCACAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18170373|gb|BM340213.1|BM340213
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18172047|gb|BM347435.1|BM347435
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18171848|gb|BM341688.1|BM341688
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|60357201|gb|DN224174.1|DN224174
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|78083438|gb|DV511831.1|DV511831
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTTTACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|211483711|gb|FL115156.1|FL115156
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTTCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCKTCCAACCATCAGAA
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCC-TCCAACCATCAGAA
EST: gi|89757408|gb|DY687023.1|DY687023
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|16920409|gb|BM074643.1|BM074643
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18165971|gb|BM335810.1|BM335810
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|37389464|gb|CF631952.1|CF631952
EST:     ATTCAAGGATGTTCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: ATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18170152|gb|BM339992.1|BM339992
EST:     AGCAGAAGTTCGGGT-CAATTCAAGGATGTCCCTGGTGACA-TTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18173363|gb|BM348751.1|BM348751
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18166460|gb|BM336299.1|BM336299
EST:     TTCGGGTGCAATTCAAGAATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAGATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: TTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|211255509|gb|FL452737.1|FL452737
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18171055|gb|BM340895.1|BM340895
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18170269|gb|BM340109.1|BM340109
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18176129|gb|BM351195.1|BM351195
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|17930457|gb|BM267417.1|BM267417
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18174518|gb|BM349906.1|BM349906
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|89759525|gb|DY688326.1|DY688326
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|16922740|gb|BM075732.1|BM075732
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18164763|gb|BM334602.1|BM334602
EST:     TGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCGTCCAACCATCAGAAG
genomic: TGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18167594|gb|BM337434.1|BM337434
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAANAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18163107|gb|BM332946.1|BM332946
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18171556|gb|BM341396.1|BM341396
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|93283385|gb|EB675649.1|EB675649
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|37424885|gb|CF650176.1|CF650176
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18164988|gb|BM334827.1|BM334827
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|33103286|gb|CF063246.1|CF063246
EST:     AGCAGAAGTTCGGGCGCAATTCAAGGATGTTCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|86473854|gb|DY240224.1|DY240224
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18660007|gb|BM500637.1|BM500637
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTTCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|113701618|gb|EE679122.1|EE679122
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTTCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18174086|gb|BM349474.1|BM349474
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|18170978|gb|BM340818.1|BM340818
EST:     GTGACATTTTTAGAA                         GCAAAAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: GTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
EST: gi|16923088|gb|BM076080.1|BM076080
EST:     AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAA                         GCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG
genomic: AGCAGAAGTTCGGGTGCAATTCAAGGATGTCCCTGGTGACATTTTTAGAAgtatgtgcat ... cctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aataagaattagatatcctggtatttgaactaaatataaatataacctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAGCCATGTACATGAAACTAACT
                  tggtatttgaactaaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
aacgaatattttatattggtttattatgttgctctgttatgtctgaataagaattagatatcctggtatttgaactaaatataaatataacctgatgaagGCAAGAAGCAAGGAAGAAATGAGTTTGTTATACGCCTCCAACCATCAGAAGCCATGTACATGAAACTAACT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - tgttgct
- - - - - - - - - - - - - - - - - - - atgtctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tcctggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aactaaa