Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtcagagttttgactcctccctttgttacttgtgacttgctgtttcatccccctatttgaaaggtggcaacctttttcttcacagtgctctcttttttcttaacaagtatgctcttgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCATCACCGGCTCGACTGTTTATGTTGACAATGGGCTCAATACAATGGGGCT

Basic information

species Zea mays
transcript GRMZM2G070422_T01
intron # 12
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G070422_T03 (Zea mays), 3'ss of exon 11
lower sequence: LOC_Os08g23810.1 (Oryza sativa), 3'ss of exon 12
gtcagagttttgactcctccctttgttacttgtgacttgctgtttcatccccctatttgaaaggtggcaacctttttcttcacagtgctctcttttttcttaacaagtatgctct-tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCATCACCGGCTCGACTGTTTATGTTGACAATGGGCTCAATACAATGGGGCT
|||  |     | ||  |  || |||||| | || |||  |||||        ||||| ||||    ||||  ||||| ||    |   ||||           ||| ||  | | ||| ||||||| || |||||||||||||| ||||||||||| ||| |||||||||| || ||||| |||||||||||||| ||||||||||| |||||||||||||||||
gtccaaaacc-gccttatttctctgttacatatg-cttcttgttt--------tatttaaaaga--acaac--ttttcatccagatatactctaac------gaaagcattttgtatgtcgaacagACGAAGTGGGGAACACAGCAGCATTCCTGGTGTCTCCATTGGCTTCCGCTATCACTGGCTCGACTGTTTACGTTGACAATGGACTCAATACAATGGGGCT
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|67015153|gb|CO443902.1|CO443902
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|32864419|gb|CF004101.1|CF004101
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7145508|gb|AW506989.1|AW506989
EST:     GATAGAGTACTCATATGTTAATGCCCCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGTGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211297572|gb|FL439289.1|FL439289
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|31364152|gb|CD448507.1|CD448507
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|67015181|gb|CO443930.1|CO443930
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|60345014|gb|DN211987.1|DN211987
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7145192|gb|AW506673.1|AW506673
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|32933638|gb|CF038450.1|CF038450
EST:     ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACCACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCC
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAA-CACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCC
EST: gi|31357208|gb|CD441565.1|CD441565
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|24768563|gb|CA403692.1|CA403692
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211078513|gb|FL462572.1|FL462572
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|32907864|gb|CF012677.1|CF012677
EST:     GATAGAGTACTCATATGTTAATGCCCCATTGCAGAAGGAGCTGTTGGCTG                         ATTAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|31362224|gb|CD446581.1|CD446581
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|67042246|gb|CO468501.1|CO468501
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAAAANGAGCTGTTGGCTG                         ATGANGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTNGC-
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCT-GCC
EST: gi|116819942|gb|EC863109.1|EC863109
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|9254230|gb|BE344698.1|BE344698
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|14191336|gb|BG833566.1|BG833566
EST:     ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAAC-CAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|16926451|gb|BM079519.1|BM079519
EST:     GCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|33101843|gb|CF061803.1|CF061803
EST:     GTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7216968|gb|AW563090.1|AW563090
EST:     ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7216969|gb|AW563091.1|AW563091
EST:     ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211104013|gb|FL460612.1|FL460612
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|32935670|gb|CF040482.1|CF040482
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|9254476|gb|BE344944.1|BE344944
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|31364652|gb|CD449007.1|CD449007
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|32908049|gb|CF012862.1|CF012862
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAACTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211497962|gb|FL450082.1|FL450082
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|6012366|gb|AW061722.1|AW061722
EST:     GGAGCTGTTGGCTG                         ATAAGGTGGGGAACACAGCTGCATTCCTGGTTTTTTCATTGGCTTTTGCCA
genomic: GGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211375763|gb|FL457930.1|FL457930
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211104012|gb|FL460611.1|FL460611
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|71766308|gb|DR964245.1|DR964245
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|6827701|gb|AW331344.1|AW331344
EST:     GAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7145191|gb|AW506672.1|AW506672
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|60399474|gb|DN232286.1|DN232286
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|67022814|gb|CO451563.1|CO451563
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|13150169|gb|BG320491.1|BG320491
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211497961|gb|FL450081.1|FL450081
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211373107|gb|FL457929.1|FL457929
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|6466754|gb|AW191414.1|AW191414
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|6526806|gb|AW216075.1|AW216075
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAAAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|44901425|gb|CK827970.1|CK827970
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|29544932|gb|CB605540.1|CB605540
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|32908050|gb|CF012863.1|CF012863
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGG
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGG
EST: gi|32907865|gb|CF012678.1|CF012678
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|32933113|gb|CF037925.1|CF037925
EST:     ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCCGCATTCCTGGTTTCTTCATTGGTTTCTGCCA
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7145190|gb|AW506671.1|AW506671
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGACTTCTGCC
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGG-CTTCTGCC
EST: gi|211297571|gb|FL439288.1|FL439288
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|116826086|gb|EC869836.1|EC869836
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|6057037|gb|AW091442.1|AW091442
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|6564253|gb|AW231875.1|AW231875
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cctttttcttcacagtgctctcttttttcttaacaagtatgctcttgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCATCACCGGCTCGACTGTTTATGTTGACAATGGGCTCAATACAATGGGGCT
                           tcttaac  putative branch site (score: 2)
                                         ctcttgtt  putative PPT
                      ttttttcttaacaa  TA-rich tract