1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaattcgtgaaccttcaaatataacagatacatattttaatctcaatatcaaatttgttgtcttagtttactgcatattttcagTTTCAGGTATTCGAGTGTAGCAGGCGTCCTTTCCACCAAGAATCAGCCTCAACACAACAAGACTACGGGCCCGGTACCCCCAAGTTTCTAAGATAATAAA
species | Zea mays |
transcript | GRMZM2G042253_T01 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: AAGACCCCCAATGCCTCCTAGGCACTTAATTCCCCCAATGCCTGCTTCAA TTTCAGGTATTCGAGTGTAGCAGGCGTCCTTTCCACCAAGAATCAGCCTCAEST: gi|211281517|gb|FL449052.1|FL449052
genomic: AAGACCCCCAATGCCTCCTAGGCACTTAATTCCCCCAATGCCTGCTTCAAgtaattcgtg ... atattttcagTTTCAGGTATTCGAGTGTAGCAGGCGTCCTTTCCACCAAGAATCAGCCTCA
EST: AAGACCCCCAATGCCTCCTAGGCACTTAATTCCCCCAATGCCTGCTTCAA TTTCAGGTATTCGAGTGTAGCAGGCGTCCTTTCCACCAAGAATCAGCCTCA
genomic: AAGACCCCCAATGCCTCCTAGGCACTTAATTCCCCCAATGCCTGCTTCAAgtaattcgtg ... atattttcagTTTCAGGTATTCGAGTGTAGCAGGCGTCCTTTCCACCAAGAATCAGCCTCA
acatattttaatctcaatatcaaatttgttgtcttagtttactgcatattttcagTTTCAGGTATTCGAGTGTAGCAGGCGTCCTTTCCACCAAGAATCAGCCTCAACACAACAAGACTACGGGCCCGGTACCCCCAAGTTTCTAAGATAATAAA
ttttaat putative branch site (score: 5)
tattttc putative PPT
ttttaatctcaatatc TA-rich tract