1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtgaagtctagagcttgtggttattgctttatgagtcaaaacatatgttagatagtgaatcatatgtcatcttacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGATGCATTGTCATGGTTGGCGGTCAATTTACTGCATACCTAAACGGGTTG
species | Zea mays |
transcript | GRMZM2G025231_T02 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAG ATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGEST: gi|88752891|gb|DY537032.1|DY537032
genomic: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGgtgaagtcta ... tacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAG
EST: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAG ATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGEST: gi|211121712|gb|FL408178.1|FL408178
genomic: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGgtgaagtcta ... tacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAG
EST: TTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAG ATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGEST: gi|211147734|gb|FL419640.1|FL419640
genomic: TTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGgtgaagtcta ... tacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAG
EST: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAG ATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGEST: gi|32916441|gb|CF021253.1|CF021253
genomic: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGgtgaagtcta ... tacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAG
EST: TGGGGAAAAGAG ATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGEST: gi|211219468|gb|FL394125.1|FL394125
genomic: TGGGGAAAAGAGgtgaagtcta ... tacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAG
EST: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAG ATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGEST: gi|32850633|gb|CD990314.1|CD990314
genomic: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGgtgaagtcta ... tacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAG
EST: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAG ATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGEST: gi|32941882|gb|CF046701.1|CF046701
genomic: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGgtgaagtcta ... tacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAG
EST: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAG ATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGEST: gi|211275142|gb|FL390045.1|FL390045
genomic: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGgtgaagtcta ... tacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAG
EST: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAG ATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGEST: gi|71324690|gb|DR799051.1|DR799051
genomic: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGgtgaagtcta ... tacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAG
EST: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAG ATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGEST: gi|211159525|gb|FL378589.1|FL378589
genomic: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGgtgaagtcta ... tacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAG
EST: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAG ATGGGCTGGATCTATGGATCAGTTACAGAAG-TATTCTAACTGGTTTCA-G
genomic: TACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGgtgaagtcta ... tacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAG
tttatgagtcaaaacatatgttagatagtgaatcatatgtcatcttacttttcagATTGGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGATGCATTGTCATGGTTGGCGGTCAATTTACTGCATACCTAAACGGGTTG
atcttac putative branch site (score: 758)
tcatcttacttttc CT-rich tract
aaaacatat TA-rich tract