1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtatcgttctcacttccacttccaccccacccaggaccggttaagatttttgtcctctgacgaaaattctaactagcatttttctttttctttttatttttgcatgagaagAGGCACCATGGCGGCGTCTCCCACAGCCCGAAAACCCAGACATCGGGCTTCTGTATACCGCCCCACGGCGGAGCGCCAGAGGCCGCTGGCGGTGGCGGCG
species | Zea mays |
transcript | GRMZM2G443668_T01 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CGCCCAACGTGTCGCAGCCTTCGCTCAGGGACATACAACAGATGCAGCAG AGGCACCATGGCGGCGTCTCCCACAGCCCGAAAACCCAGACATCGGGCTTCEST: gi|31359638|gb|CD443995.1|CD443995
genomic: CGCCCAACGTGTCGCAGCCTTCGCTCAGGGACATACAACAGATGCAGCAGgtatcgttct ... gcatgagaagAGGCACCATGGCGGCGTCTCCCACAGCCCGAAAACCCAGACATCGGGCTTC
EST: CGCCCAACGTGTCGCAGCCTTCGCTCAGGGACATACAACAGATGCAGCAG AAGAGGCACCATGGCGGCGTCTCCCACAGGCC-AAAACCCAGACATCGGGCEST: gi|148986160|gb|EE029925.2|EE029925
genomic: CGCCCAACGTGTCGCAGCCTTCGCTCAGGGACATACAACAGATGCAGCAGgtatcgttct ... gcatgagaagA-G-G-CACCATGGCGGCGTCTCCCACAGCCCGAAAACCCAGACATCGGGC
EST: CGCCCAACGTGTCGCAGCCTTCGCTCAGGGACATACAACAGATGCAGCAG AGGCACCATGGCGGCGTCTCCCACAGCCCGAAAACCCAGACATCGGGCTTCEST: gi|149101215|gb|EE187326.2|EE187326
genomic: CGCCCAACGTGTCGCAGCCTTCGCTCAGGGACATACAACAGATGCAGCAGgtatcgttct ... gcatgagaagAGGCACCATGGCGGCGTCTCCCACAGCCCGAAAACCCAGACATCGGGCTTC
EST: CGCCCAACGTGTCGCAGCCTTCGCTCAGGGACATACAACAGATGCAGCAG AGGCACCATGGCGGCGTCTCCCACAGCCCGAAAACCCAGACATCGGGCTTC
genomic: CGCCCAACGTGTCGCAGCCTTCGCTCAGGGACATACAACAGATGCAGCAGgtatcgttct ... gcatgagaagAGGCACCATGGCGGCGTCTCCCACAGCCCGAAAACCCAGACATCGGGCTTC
ctgacgaaaattctaactagcatttttctttttctttttatttttgcatgagaagAGGCACCATGGCGGCGTCTCCCACAGCCCGAAAACCCAGACATCGGGCTTCTGTATACCGCCCCACGGCGGAGCGCCAGAGGCCGCTGGCGGTGGCGGCG
ttctaac putative branch site (score: 373)
catttttctttttctt putative PPT
tagcatttttcttttt TA-rich tract