1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaacagatagtctctttcgtatatgtgtaatgttctgttctaacaggtgaaatatgtatacttgtccgtaccaccctaacttgtagtcacttttatttttccagATGGTTTTGGTTCAACATCTATGCATGTATCTCATGACACTGTACAAAGCTCACACCCCACACAAAAAACTAGGTTCTTCTGTACAAAATCCATACTAGA
species | Zea mays |
transcript | GRMZM2G417410_T01 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: ACAGTATACAAATCCATAAATTCCTTGTGGACAAATGCTTACAAGACAAG ATGGTTTTGGTTCAACATCTATGCATGTATCTCATGACACTGTACAAAGCTEST: gi|166532393|gb|EG302014.1|EG302014
genomic: ACAGTATACAAATCCATAAATTCCTTGTGGACAAATGCTTACAAGACAAGgtaacagata ... atttttccagATGGTTTTGGTTCAACATCTATGCATGTATCTCATGACACTGTACAAAGCT
EST: GTATACAAATCCATAAATTCCTTGTGGACAAATGCTTACAAGACAAG ATGGTTTTGGTTCAACATCTATGCATGTATCTCATGACACTGT-CAAAGC
genomic: GTATACAAATCCATAAATTCCTTGTGGACAAATGCTTACAAGACAAGgtaacagata ... atttttccagATGGTTTTGGTTCAACATCTATGCATGTATCTCATGACACTGTACAAAGC
aaatatgtatacttgtccgtaccaccctaacttgtagtcacttttatttttccagATGGTTTTGGTTCAACATCTATGCATGTATCTCATGACACTGTACAAAGCTCACACCCCACACAAAAAACTAGGTTCTTCTGTACAAAATCCATACTAGA
ccctaac putative branch site (score: 2)
tcacttttatttttcc putative PPT
tcacttttattttt TA-rich tract