1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtattgctgaataataggcacacttttttatttgaaacccttgtgcctcacatcgttgactgacccaggtatttgtttatgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTGCTGGCGTCTGTTCTGGTTTGTGTTGTGCTTTGTGTCTTATCTTCCGAAG
species | Zea mays |
transcript | GRMZM2G118014_T02 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: GAGCGTTCACGCTCCAGGGAGCGCAGCAG GCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTGEST: gi|83279326|gb|DV943334.1|DV943334
genomic: GAGCGTTCACGCTCCAGGGAGCGCAGCAGgtattgctga ... atgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTG
EST: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAG GCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTGEST: gi|14243774|gb|BG841437.2|BG841437
genomic: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAGgtattgctga ... atgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTG
EST: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAG GCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTGEST: gi|211519312|gb|FL433830.1|FL433830
genomic: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAGgtattgctga ... atgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTG
EST: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAG GCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTGEST: gi|211148420|gb|FL475620.1|FL475620
genomic: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAGgtattgctga ... atgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTG
EST: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAG GCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTGEST: gi|76286406|gb|DV025974.1|DV025974
genomic: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAGgtattgctga ... atgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTG
EST: GAGCGTTCACGCTCCAGGGAGCGCAGCAG GCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTGEST: gi|161588478|gb|EY959060.1|EY959060
genomic: GAGCGTTCACGCTCCAGGGAGCGCAGCAGgtattgctga ... atgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTG
EST: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAG GCGCCATGAGAGEST: gi|149086754|gb|EE176294.2|EE176294
genomic: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAGgtattgctga ... atgatttcagGCGCCATGAGAG
EST: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAG GCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTGEST: gi|24767722|gb|CA402862.1|CA402862
genomic: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAGgtattgctga ... atgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTG
EST: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAG GCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTGEST: gi|60349927|gb|DN216900.1|DN216900
genomic: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAGgtattgctga ... atgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTG
EST: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAG GCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTGEST: gi|211168469|gb|FK981061.1|FK981061
genomic: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAGgtattgctga ... atgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTG
EST: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAG GCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTG
genomic: GGATATGACTCAAGGAGAAGAGAGCGTTCACGCTCCAGGGAGCGCAGCAGgtattgctga ... atgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTG
gaaacccttgtgcctcacatcgttgactgacccaggtatttgtttatgatttcagGCGCCATGAGAGATACTAAATGTTACTCCATGGCTGACAGATTTTGGATTGCTGGCGTCTGTTCTGGTTTGTGTTGTGCTTTGTGTCTTATCTTCCGAAG
gactgac putative branch site (score: 2)
tatttgtttatgattt TA-rich tract