1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' |
gttagtatcatcaacaaaattcttcttttctaaagctatgttcttttcttttattaatcatttggtcgccattctcttcagCTATTTACATGGCAACAAACTCACTGGACATATACCACCAGAACTGGGGAACATGAGTAAACTTAGCTACCT
species | Zea mays |
transcript | GRMZM2G082855_T05 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: GTGGGGCCTATTCCTCCTATACTTGGCAACCTGTCCTACACAGGCAAACT CTATTTACATGGCAACAAACTCACTGGACATATACCACEST: gi|149079906|gb|EE168912.2|EE168912
genomic: GTGGGGCCTATTCCTCCTATACTTGGCAACCTGTCCTACACAGGCAAACTgttagtatca ... ttctcttcagCTATTTACATGGCAACAAACTCACTGGACATATACCAC
EST: GTGGGGCCTATTCCTCCTATACTTGGCAACCTGTCCTACACAGGCCAACT CTATTTACATGGCAACAAACTCACTGGACATATACCACCAGAACTGGGGEST: gi|148964982|gb|EC906062.2|EC906062
genomic: GTGGGGCCTATTCCTCCTATACTTGGCAACCTGTCCTACACAGGCAAACTgttagtatca ... ttctcttcagCTATTTACATGGCAACAAACTCACTGGACATATACCACCAGAACTGGGG
EST: GTGGGGCCTATTCCTCCTATACTTGGCAACCTGTCCTACACAGGCAAACT CTATTTACATGGCAACAAACTCACTGGACATATACCACCAGAACTGGGGAAEST: gi|101383199|gb|EB813654.1|EB813654
genomic: GTGGGGCCTATTCCTCCTATACTTGGCAACCTGTCCTACACAGGCAAACTgttagtatca ... ttctcttcagCTATTTACATGGCAACAAACTCACTGGACATATACCACCAGAACTGGGGAA
EST: GTGGGGCCTATTCCTCCTATACTTGGCAACCTGTCCTACACAGGCAAACT CTATTTACATGGCAACAAACTCACTGGACATATACCACCAGAACTGGGGAA
genomic: GTGGGGCCTATTCCTCCTATACTTGGCAACCTGTCCTACACAGGCAAACTgttagtatca ... ttctcttcagCTATTTACATGGCAACAAACTCACTGGACATATACCACCAGAACTGGGGAA
tttctaaagctatgttcttttcttttattaatcatttggtcgccattctcttcagCTATTTACATGGCAACAAACTCACTGGACATATACCACCAGAACTGGGGAACATGAGTAAACTTAGCTACCT
tattaat putative branch site (score: 2)
tcgccattctcttc putative PPT
tatgttcttttctttt TA-rich tract