1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtcagagttttgactcctccctttgttacttgtgacttgctgtttcatccccctatttgaaaggtggcaacctttttcttcacagtgctctcttttttcttaacaagtatgctcttgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCATCACCGGCTCGACTGTTTATGTTGACAATGGGCTCAATACAATGGGGCT
species | Zea mays |
transcript | GRMZM2G070422_T03 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|7145508|gb|AW506989.1|AW506989
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCCCCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGTGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|211297572|gb|FL439289.1|FL439289
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|60345014|gb|DN211987.1|DN211987
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|7145192|gb|AW506673.1|AW506673
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|116819942|gb|EC863109.1|EC863109
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|32933638|gb|CF038450.1|CF038450
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACCACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCEST: gi|211078513|gb|FL462572.1|FL462572
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAA-CACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCC
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|14191336|gb|BG833566.1|BG833566
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAAC-CAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|60396705|gb|DN229571.1|DN229571
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|16926451|gb|BM079519.1|BM079519
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|33101843|gb|CF061803.1|CF061803
genomic: GCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|7216968|gb|AW563090.1|AW563090
genomic: GTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|7216969|gb|AW563091.1|AW563091
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|211104013|gb|FL460612.1|FL460612
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|32935670|gb|CF040482.1|CF040482
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|9254476|gb|BE344944.1|BE344944
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|6012366|gb|AW061722.1|AW061722
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GGAGCTGTTGGCTG ATAAGGTGGGGAACACAGCTGCATTCCTGGTTTTTTCATTGGCTTTTGCCAEST: gi|211104012|gb|FL460611.1|FL460611
genomic: GGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|6466754|gb|AW191414.1|AW191414
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|6827701|gb|AW331344.1|AW331344
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|7145191|gb|AW506672.1|AW506672
genomic: GAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|211373107|gb|FL457929.1|FL457929
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|44901425|gb|CK827970.1|CK827970
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|211297571|gb|FL439288.1|FL439288
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|32933113|gb|CF037925.1|CF037925
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCCGCATTCCTGGTTTCTTCATTGGTTTCTGCCAEST: gi|7145190|gb|AW506671.1|AW506671
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGACTTCTGCCEST: gi|116826086|gb|EC869836.1|EC869836
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGG-CTTCTGCC
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCAEST: gi|6057037|gb|AW091442.1|AW091442
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
cctttttcttcacagtgctctcttttttcttaacaagtatgctcttgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCATCACCGGCTCGACTGTTTATGTTGACAATGGGCTCAATACAATGGGGCT
tcttaac putative branch site (score: 3377)
ctcttgtt putative PPT
ttttttcttaacaa TA-rich tract