1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gttcaccagatatttgttttgttcagtattcacctgagacttgaagtttgtcatatgtttttcttatctctatctgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACCAAACCTATGACCTCAACTTTAAGGAGGAG
species | Zea mays |
transcript | GRMZM2G048371_T01 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: GACTTGAGCTCTTGAAA-CTGCAATTGAGAAGGCTGGATACACTGGCNAG GTTGTCATCGGAATGGATGTTGCTGCTTTCCGAGTTTEST: gi|67011307|gb|CO440056.1|CO440056
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTT-CGGAGTTT
EST: -ACTTGAGCTCTTGAAA-CTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCNGAGTTTTACAGTGACAAGGACEST: gi|60358894|gb|DN225867.1|DN225867
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|211377302|gb|FL186755.1|FL186755
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGGAATGGATGTTGCTGCTTTCGGAAGTTT-ACAGTGACAAGEST: gi|31360635|gb|CD444992.1|CD444992
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGG-AATGGATGTTGCTGCTT-CGGA-GTTTTACAGTGACAAG
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|60399892|gb|DN232702.1|DN232702
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|61118137|gb|DN559098.1|DN559098
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|211377303|gb|FL186756.1|FL186756
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAAATGGATGEST: gi|31357253|gb|CD441610.1|CD441610
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAA-TGGATG
EST: TGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|32826370|gb|CD966048.1|CD966048
genomic: TGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|31355741|gb|CD440098.1|CD440098
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGATTCCTGAAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|76294188|gb|DV033756.1|DV033756
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GGTGTCATCGGAATGGATGTTGCTGCTEST: gi|211425250|gb|FL005768.1|FL005768
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCT
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|31354997|gb|CD439354.1|CD439354
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAA GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|31357159|gb|CD441516.1|CD441516
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|28931188|gb|CB334549.1|CB334549
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67026276|gb|CO455025.1|CO455025
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67023203|gb|CO451952.1|CO451952
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: ACTNGAGCTCTTGTAAACTGCA-TTGGAGAAGGCTGGAT-CACTGGCAAG GTTG-CATCCGAATGGATGGTGCTGCTTCGGAGTTTEST: gi|5268740|gb|AI770704.1|AI770704
genomic: ACTTGAGCTCTTGAAAACTGCAATTG-AGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTT
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67011056|gb|CO439805.1|CO439805
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAA-CTGCAATTGAGAAG-CTGG-TACACTGGCAAG GTTGTCATCNGAATGGATGTTGCTGCTTNCG-AGTTTTACAGTGACAAGGAEST: gi|31353433|gb|CD437790.1|CD437790
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTT-CGGAGTTTTACAGTGACAAGGA
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|31353535|gb|CD437892.1|CD437892
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67022401|gb|CO451150.1|CO451150
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|31352214|gb|CD436571.1|CD436571
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|213179295|gb|FM184302.1|FM184302
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67018108|gb|CO446857.1|CO446857
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|31361447|gb|CD445804.1|CD445804
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|111991147|gb|EE332203.1|EE332203
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|21987719|gb|BQ779247.1|BQ779247
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|60347267|gb|DN214240.1|DN214240
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|28187817|gb|CB179427.1|CB179427
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: CAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67022560|gb|CO451309.1|CO451309
genomic: CAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67011708|gb|CO440457.1|CO440457
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAA-CTGCA-TTGAGAAG-CTGGAT-CACTGGCA-G GTTGTCATCGGA-TGGATGGTG-TGCTTCGGAGTTT-ACAGTGACAAG-ACEST: gi|8367282|gb|BE050227.1|BE050227
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACT-----G GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67030419|gb|CO459168.1|CO459168
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: ACTTGAGCTCTTGAAA-CTGCAATTGAGAAGGCTGGATACACTGGNCA-G GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAEST: gi|67010780|gb|CO439529.1|CO439529
genomic: ACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGG-CAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGA
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67040510|gb|CO466765.1|CO466765
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: CTTGAGCTCTTNGAAA-CTGNCA-TTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGGATGT-GCTGCTTCNGAGTTT-ACAGTGACANGGAEST: gi|33093609|gb|CF053603.1|CF053603
genomic: CTTGAGCTCTT-GAAAACTG-CAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGG-ATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGA
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|60338715|gb|DN205688.1|DN205688
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|60398686|gb|DN231502.1|DN231502
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67021372|gb|CO450121.1|CO450121
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGACCTCTTGGAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTEST: gi|14204058|gb|BG837735.1|BG837735
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCT
EST: ACTTGGA-CTCTTGAAAACTGCAATTGAGAAGGCTGGATACATTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGMCEST: gi|33094991|gb|CF054985.1|CF054985
genomic: ACTT-GAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|32915417|gb|CF020229.1|CF020229
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|31351690|gb|CD436047.1|CD436047
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67015783|gb|CO444532.1|CO444532
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67022155|gb|CO450904.1|CO450904
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: ACTTGAGCTCTTGCAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|31362206|gb|CD446563.1|CD446563
genomic: ACTTGAGCTCTTG-AAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67016494|gb|CO445243.1|CO445243
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67015750|gb|CO444499.1|CO444499
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67023954|gb|CO452703.1|CO452703
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|21843176|gb|BQ703742.1|BQ703742
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|31349581|gb|CD433938.1|CD433938
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: ACTTGAGCTCTTGAAAACTGCAATTGAGAAAGCTGGATACACTNGGCA-G GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAEST: gi|14204206|gb|BG837883.1|BG837883
genomic: ACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACT-GGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGA
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|51592397|gb|CV071543.1|CV071543
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|211301118|gb|FL169206.1|FL169206
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|31352118|gb|CD436475.1|CD436475
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGCCTGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|84980804|gb|DW531153.1|DW531153
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|31350995|gb|CD435352.1|CD435352
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|32864127|gb|CF003809.1|CF003809
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|211377301|gb|FL186754.1|FL186754
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACEST: gi|67038520|gb|CO464838.1|CO464838
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
EST: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAG GTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
genomic: GACTTGAGCTCTTGAAAACTGCAATTGAGAAGGCTGGATACACTGGCAAGgttcaccaga ... tgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGAC
tcacctgagacttgaagtttgtcatatgtttttcttatctctatctgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACCAAACCTATGACCTCAACTTTAAGGAGGAG
tttttcttatctctat CT-rich tract
atatgtttttcttat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttcaccagatatttgttttgttcagtattcacctgagacttgaagtttgtcatatgtttttcttatctctatctgaatgctagGTTGTCATCGGAATGGATGTTGCTGCTTCGGAGTTTTACAGTGACAAGGACCAAACCTATGACCTCAACTTTAAGGAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG