1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtcatagcttttcatgatactacttgtaacatgacatcttgtgattctgaactttcatgctaggtcgtgcttttattttagataatggacatgagaacatgaatggctgaccctgttttgctgcatgccagGCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAAGGGGCGTCCAAGGTGAACATTTCCTTGGTAGTCAATGACAGTGAGGCAA
species | Zea mays |
transcript | GRMZM2G024686_T01 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAG GCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAAEST: gi|160481349|gb|EY254273.1|EY254273
genomic: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAGgtcatagctt ... tgcatgccagGCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAA
EST: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAG GCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAAEST: gi|93016257|gb|EB641777.1|EB641777
genomic: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAGgtcatagctt ... tgcatgccagGCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAA
EST: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAG GCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAAEST: gi|211498958|gb|FL033696.1|FL033696
genomic: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAGgtcatagctt ... tgcatgccagGCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAA
EST: TCATCTCACTGATAGGGAATGTACAGAGATCGTCATTGATTCTTGAAAAG GCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAAEST: gi|148945408|gb|EC890632.2|EC890632
genomic: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAGgtcatagctt ... tgcatgccagGCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAA
EST: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAG GCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAAEST: gi|149000753|gb|EE037973.2|EE037973
genomic: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAGgtcatagctt ... tgcatgccagGCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAA
EST: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAG GCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAAEST: gi|148940635|gb|EC885446.2|EC885446
genomic: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAGgtcatagctt ... tgcatgccagGCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAA
EST: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAG GCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAA
genomic: TCATCTCACTGATAGGGAATGTACAGCGATCGTCATTGATTCTTGAAAAGgtcatagctt ... tgcatgccagGCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAA
tttagataatggacatgagaacatgaatggctgaccctgttttgctgcatgccagGCATTCAACGTTCTGCGAAGAAATGGTGTTAATGTCCAGATGATCTCACAAGGGGCGTCCAAGGTGAACATTTCCTTGGTAGTCAATGACAGTGAGGCAA
ggctgac putative branch site (score: 30)
ttttgct putative PPT
ataat TA-rich tract