1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtatgttttaatttttcaaaatatttgtggtgtcacaagaaagttctccttttccttttattcgccttaaatgaattggttctcacattgctgctgtatcagGAACTGGACTTGAGTGGCCTTGGAGTGACCAGTGTACCAGCTGCCGCGTGGGAGACAAGTGATGTGGTGAAACTGGATCTTTCTAAAAATTCAATAGAAG
species | Zea mays |
transcript | GRMZM2G015090_T01 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CTAAAGATGACCAAATTGCTGCAGCAAGGCGCTTGTCCTTATCTTCAAAG GAACTG-ACTTGAGTGGCCTTGGAGTGACCAGTGTACCAGCTGCCGCGTGGEST: gi|211374390|gb|FK951698.1|FK951698
genomic: CTAAAGATGACCAAATTGCTGCAGCAAGGCGCTTGTCCTTATCTTCAAAGgtatgtttta ... gctgtatcagGAACTGGACTTGAGTGGCCTTGGAGTGACCAGTGTACCAGCTGCCGCGTGG
EST: CTAAAGATGACCAAATTGCTGCAGCAAGGCGCTTGTNCTTATCTTCAAAG GAACTGGACTTGAGTGGCCTTGGAGTGACCAGTGTACCAGCTGCCGCGTGGEST: gi|211330833|gb|FL087712.1|FL087712
genomic: CTAAAGATGACCAAATTGCTGCAGCAAGGCGCTTGTCCTTATCTTCAAAGgtatgtttta ... gctgtatcagGAACTGGACTTGAGTGGCCTTGGAGTGACCAGTGTACCAGCTGCCGCGTGG
EST: CTAAAGATGACCAAATTGCTGCAGCAAGGCGCTTGTCCTTATCTTCAAAG GAACTGGACTTGAGTGGCCTTGGAGTGACCAGTGTACCAGCTGCCGCGTGG
genomic: CTAAAGATGACCAAATTGCTGCAGCAAGGCGCTTGTCCTTATCTTCAAAGgtatgtttta ... gctgtatcagGAACTGGACTTGAGTGGCCTTGGAGTGACCAGTGTACCAGCTGCCGCGTGG
ccttttccttttattcgccttaaatgaattggttctcacattgctgctgtatcagGAACTGGACTTGAGTGGCCTTGGAGTGACCAGTGTACCAGCTGCCGCGTGGGAGACAAGTGATGTGGTGAAACTGGATCTTTCTAAAAATTCAATAGAAG
ttctcac putative branch site (score: 116)
ttaaatgaatt TA-rich tract