1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaatatggtttccaaagccacctgttgagcataaaaaatattcgtgaggtattgacgctagattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGATGACTTGCCCCCTCTCGAGAAGAATATGAACCACCTGAACCTCGACGA
species | Zea mays |
transcript | GRMZM2G114758_T03 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|110193278|gb|EC875176.1|EC875176
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATTTGAAGGTGATTCAGACGEST: gi|78544567|gb|DV622065.1|DV622065
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACAAGGAGGAGGGATCTGAAGGTGATTCAGEST: gi|86468292|gb|DY234662.1|DY234662
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGG-G--ATCTGAAGGTGATTCAG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|6601669|gb|AW256065.1|AW256065
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTANCTCGAGTGTTCCAAAGCCNCCTGTAAACG GGGCAGAGGAATCNCGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|211377879|gb|FL093310.1|FL093310
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|71307452|gb|DR789931.1|DR789931
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|83279425|gb|DV943433.1|DV943433
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|31356143|gb|CD440500.1|CD440500
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAATG GGGCAGAGGAATCACGGCAAAACACGGAGGEST: gi|76016358|gb|DT943528.1|DT943528
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCCAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAEST: gi|71307450|gb|DR789930.1|DR789930
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGA
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|94473540|gb|EB702498.1|EB702498
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|88750787|gb|DY534928.1|DY534928
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|60345140|gb|DN212113.1|DN212113
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|78074927|gb|DV503361.1|DV503361
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATTTGAAGGTGATTCAGACGEST: gi|78118561|gb|DV536945.1|DV536945
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|89251519|gb|DY623305.1|DY623305
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACG GGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGEST: gi|211480276|gb|FL093313.1|FL093313
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACG
EST: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCAAAAGCCACCTGTAAACT GGGCAGAGGAATCACNGCAAAACACGGGAGGTATCTGAANGTGATTCAGAC
genomic: GAAGTCATGGTTATCAAGTAACTCGAGTGTTCCAAAGCCACCTGTAAACGgtaatatggt ... agattgacagGGGCAGAGGAATCACGGCAAAACACGG-AGGGATCTGAAGGTGATTCAGAC
aagccacctgttgagcataaaaaatattcgtgaggtattgacgctagattgacagGGGCAGAGGAATCACGGCAAAACACGGAGGGATCTGAAGGTGATTCAGACGATGACTTGCCCCCTCTCGAGAAGAATATGAACCACCTGAACCTCGACGA
tattgac putative branch site (score: 2)
agcataaaaaatatt TA-rich tract