1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gttaaaagtctaaacttgtgtaactctgttttcctatctagaatttttcaatttgcagacccgttattgtttttaacttggtaacttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGTATGCACTCCAGACAATTGATACTGTTTATGGCTCTATGTAACTAGCTG
species | Zea mays |
transcript | GRMZM2G053531_T01 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGEST: gi|84969850|gb|DW468264.1|DW468264
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGEST: gi|60358119|gb|DN225092.1|DN225092
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGEST: gi|74035418|gb|DT535906.1|DT535906
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCGGCTGAATTCCAGEST: gi|78109883|gb|DV528299.1|DV528299
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGEST: gi|60341680|gb|DN208653.1|DN208653
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGEST: gi|88754483|gb|DY538624.1|DY538624
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTTTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGEST: gi|113702906|gb|EE680410.1|EE680410
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGEST: gi|60394174|gb|DN227044.1|DN227044
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGEST: gi|60359057|gb|DN226030.1|DN226030
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGEST: gi|116822203|gb|EC865582.1|EC865582
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCGGCTGAATTCCAGEST: gi|32846823|gb|CD986504.1|CD986504
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCGGCTGAATTCCAGEST: gi|6828185|gb|AW331828.1|AW331828
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGEST: gi|78021679|gb|DV490066.1|DV490066
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
EST: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAG CGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
genomic: AGGACAAACTGATTCGGCTCAGGTCTAAGCGGGAGAACTGGGCCTGAGAGgttaaaagtc ... cttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAG
agaatttttcaatttgcagacccgttattgtttttaacttggtaacttttaacagCGTCGCATGTCTGGATGGTGTAAATAAAGATGACGCTCAGCTGAATTCCAGTATGCACTCCAGACAATTGATACTGTTTATGGCTCTATGTAACTAGCTG
tggtaac putative branch site (score: 35)
ctttt CT-rich tract
ttattgtttttaactt TA-rich tract