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gttagcctatcgaatatctacctttcctttatttctttgcttgggcataaagttattctttttgtgctgagaattacgatgatgcagGACTTGTGGAGAAGCCGTCGTAGCCTTAAAGATGTTGAGGGTTTTGACCACTCAGTTGTTAATGATACTTTAGGGGCCTGTGGTGACCTGCCTGGAGAGC
species | Zea mays |
transcript | GRMZM2G037624_T01 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: TCATCATGCCTTGTAAGGGAATATTAAGGTTCTGTGCCATGTCACTTCCG GACTTGTGGAGAAGCCGTCGTAGCCTTAAAGATGTTGAGGGTTTTGACCACEST: gi|6022628|gb|AW067440.1|AW067440
genomic: TCATCATGCCTTGTAAGGGAATATTAAGGTTCTGTGCCATGTCACTTCCGgttagcctat ... gatgatgcagGACTTGTGGAGAAGCCGTCGTAGCCTTAAAGATGTTGAGGGTTTTGACCAC
EST: TCATCATGCCTTGGAAGGGAATATTAAGGTTCTGNGCCATGTCACTTCCG GACTTGTGGAGAAGCCGTCGTEST: gi|60398284|gb|DN231100.1|DN231100
genomic: TCATCATGCCTTGTAAGGGAATATTAAGGTTCTGTGCCATGTCACTTCCGgttagcctat ... gatgatgcagGACTTGTGGAGAAGCCGTCGT
EST: TCATCATGCCTTGTAAGGGAATATTAAGGTTCTGTGCCATGTCACTTCCG GACTTGTGGAGAAGCCGTCGTAGCCTTAAAGATGTTGAGGGTTTTGACCACEST: gi|71450153|gb|DR831203.1|DR831203
genomic: TCATCATGCCTTGTAAGGGAATATTAAGGTTCTGTGCCATGTCACTTCCGgttagcctat ... gatgatgcagGACTTGTGGAGAAGCCGTCGTAGCCTTAAAGATGTTGAGGGTTTTGACCAC
EST: TCATCATGCCTTGTAAGGGAATATTAAGGTTCTGTGCCATGTCACTTCCG GACTTGTGGAGAAGCCGTCGTAGCCTTAAAGATGTTGAGGGTTTTGACCACEST: gi|149009603|gb|EE154023.2|EE154023
genomic: TCATCATGCCTTGTAAGGGAATATTAAGGTTCTGTGCCATGTCACTTCCGgttagcctat ... gatgatgcagGACTTGTGGAGAAGCCGTCGTAGCCTTAAAGATGTTGAGGGTTTTGACCAC
EST: TCATCATGCCTTGTAAGGGAATATTAAGGTTCTGTGCCATGTCACTTCCG GACTTGTGGAGAAGCCGTCGTAGCCTTAAAGATGTTGAGGGTTTTGACCAC
genomic: TCATCATGCCTTGTAAGGGAATATTAAGGTTCTGTGCCATGTCACTTCCGgttagcctat ... gatgatgcagGACTTGTGGAGAAGCCGTCGTAGCCTTAAAGATGTTGAGGGTTTTGACCAC
ttctttgcttgggcataaagttattctttttgtgctgagaattacgatgatgcagGACTTGTGGAGAAGCCGTCGTAGCCTTAAAGATGTTGAGGGTTTTGACCACTCAGTTGTTAATGATACTTTAGGGGCCTGTGGTGACCTGCCTGGAGAGC
ataaagttattctttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttagcctatcgaatatctacctttcctttatttctttgcttgggcataaagttattctttttgtgctgagaattacgatgatgcagGACTTGTGGAGAAGCCGTCGTAGCCTTAAAGATGTTGAGGGTTTTGACCACTCAGTTGTTAATGATACTTTAGGGGCCTGTGGTGACCTGCCTGGAGAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA