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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagcaaagcaagccctcgcaccccccgtcccgtccgtctccccgccgccggccccattcattccacggcgctaccgctgactctttctccgaacgtggtttgtctcttcgtttgctcgagcagCCAGCCGACCCGTCTCCAGCAATGCGGGCGGCGTCGGGGTCGGCTCGCTGGAGGTGGGCGGCGTCGTCGCCGCCGCCGACACCTACAACGCCTCCAGGCA

Basic information

species Zea mays
transcript GRMZM5G875864_T06
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cgctaccgctgactctttctccgaacgtggtttgtctcttcgtttgctcgagcagCCAGCCGACCCGTCTCCAGCAATGCGGGCGGCGTCGGGGTCGGCTCGCTGGAGGTGGGCGGCGTCGTCGCCGCCGCCGACACCTACAACGCCTCCAGGCA
      cgctgac  putative branch site (score: 3)
                                  tctcttcgtttgctc  putative PPT