Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagaagacgctttcctttatatttgacacatcgttctctctctcttcaagaatcgaacctgatgcttgtatatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATGGACAAGTTCCTCAAGCAGGCATTCGTCGCCGCGTCCATCAAGTTCCCGA

Basic information

species Zea mays
transcript GRMZM5G873519_T02
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM5G873519_T01 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os01g32830.2 (Oryza sativa), 3'ss of exon 1
---------------gtgagaagacgctttcctttatatttgacacatcgttctctctctcttcaagaatcgaacctgatgcttgtata---tatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATGGACAAGTTCCTCAAGCAGGCATTCGTCGCCGCGTCCATCAAGTTCCCGA
               || | ||  | |    | |  |    ||     | |   ||  |  |  ||    |   | |||    |||||    | |  || |  ||||| | ||||| ||||| ||||||||||| ||  |||| |||   ||||||||||| |||||||| ||||  || ||||||||||||||||| |
gtgagtcgtcaatcagtcaaaatgcacgcagcctcgt-cgcgatttcgcatgacctgccgatcgaactgacatgcgtgagctatgtatggattttatagCTCGTCGGGATCGCGCACCTGCTGGTGTCGCTGGGGATCGTGCTGGCCTCCGACAAGTTCCTGAAGCAGGCGTTCGCGGCGGCGTCCATCAAGTTCCCCA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|78076172|gb|DV504606.1|DV504606
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211339837|gb|FL096300.1|FL096300
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211347030|gb|FL096344.1|FL096344
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211337445|gb|FL096291.1|FL096291
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|74234749|gb|DT642663.1|DT642663
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211337441|gb|FL096287.1|FL096287
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211349427|gb|FL096354.1|FL096354
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211344632|gb|FL096334.1|FL096334
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|148933875|gb|EC877845.2|EC877845
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211344631|gb|FL096333.1|FL096333
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211354248|gb|FL096387.1|FL096387
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTTCACAGGAGTGCTGCCCGCC                         ATTAATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGGATTCTGCTCGCCAT
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTA-TCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCAT
EST: gi|211349438|gb|FL096365.1|FL096365
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211339846|gb|FL096309.1|FL096309
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|149099738|gb|EE185791.2|EE185791
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211339842|gb|FL096305.1|FL096305
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211337449|gb|FL096295.1|FL096295
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211344634|gb|FL096336.1|FL096336
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211347029|gb|FL096343.1|FL096343
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211344628|gb|FL096330.1|FL096330
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211347032|gb|FL096346.1|FL096346
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211342239|gb|FL096323.1|FL096323
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211354249|gb|FL096388.1|FL096388
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211342236|gb|FL096320.1|FL096320
EST:     CGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTNGCCCGCC                         ATTATCGGGGGTGGCGCATCCTGCTCGTGTCGCTTGGGGCATTC
genomic: CGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCT-GCCCGCCgtgagaagac ... atatatgcagATTATCGGGG-TGGCGCATC-TGCTCGTGTCGCT-GGG-CATTC
EST: gi|211337442|gb|FL096288.1|FL096288
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211347037|gb|FL096351.1|FL096351
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCT
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCT
EST: gi|211349433|gb|FL096360.1|FL096360
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211349437|gb|FL096364.1|FL096364
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211349435|gb|FL096362.1|FL096362
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211457241|gb|FL096396.1|FL096396
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211344626|gb|FL096328.1|FL096328
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211349432|gb|FL096359.1|FL096359
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211339841|gb|FL096304.1|FL096304
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211344630|gb|FL096332.1|FL096332
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211351839|gb|FL096371.1|FL096371
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211347036|gb|FL096350.1|FL096350
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211296010|gb|FL014406.1|FL014406
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTAATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCAT
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTA-TCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCAT
EST: gi|76285948|gb|DV025516.1|DV025516
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211342229|gb|FL096313.1|FL096313
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211354251|gb|FL096390.1|FL096390
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGGCTCGTGTC
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTG-CTCGTGTC
EST: gi|211339835|gb|FL096298.1|FL096298
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211351838|gb|FL096370.1|FL096370
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211351847|gb|FL096379.1|FL096379
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211342234|gb|FL096318.1|FL096318
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211351841|gb|FL096373.1|FL096373
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211354250|gb|FL096389.1|FL096389
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211349436|gb|FL096363.1|FL096363
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211349440|gb|FL096367.1|FL096367
EST:     CGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCCGC-                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCAT
genomic: CGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCC-GCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCAT
EST: gi|211347034|gb|FL096348.1|FL096348
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211342240|gb|FL096324.1|FL096324
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211354254|gb|FL096393.1|FL096393
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCCTGTCGCCTGGGCAT-CTGCTCGCCCA
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGC-TGGGCATTCTGCTCGCC-A
EST: gi|211347039|gb|FL096353.1|FL096353
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCAAG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211354252|gb|FL096391.1|FL096391
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211342233|gb|FL096317.1|FL096317
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211342237|gb|FL096321.1|FL096321
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|74241098|gb|DT649012.1|DT649012
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211344636|gb|FL096338.1|FL096338
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211339847|gb|FL096310.1|FL096310
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211351845|gb|FL096377.1|FL096377
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211354255|gb|FL096394.1|FL096394
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|148974371|gb|EE025146.2|EE025146
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211337451|gb|FL096297.1|FL096297
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211161559|gb|FL410914.1|FL410914
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTC
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTC
EST: gi|211347026|gb|FL096340.1|FL096340
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211351848|gb|FL096380.1|FL096380
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211344635|gb|FL096337.1|FL096337
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTTCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211339836|gb|FL096299.1|FL096299
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211349439|gb|FL096366.1|FL096366
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCACCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211339844|gb|FL096307.1|FL096307
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211351840|gb|FL096372.1|FL096372
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211351849|gb|FL096381.1|FL096381
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211344627|gb|FL096329.1|FL096329
EST:     GCTGGGCAC-GGACACGCCGCCAGTGCTTCAAGCAG-AGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGC
genomic: GCTGG-CACCGGACACGCCGCCAGTGCTTCCA-CAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGC
EST: gi|211457243|gb|FL096398.1|FL096398
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211351844|gb|FL096376.1|FL096376
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|91875592|gb|EB405549.1|EB405549
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
EST: gi|211349428|gb|FL096355.1|FL096355
EST:     CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCC                         ATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG
genomic: CCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCgtgagaagac ... atatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gacacatcgttctctctctcttcaagaatcgaacctgatgcttgtatatatgcagATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATGGACAAGTTCCTCAAGCAGGCATTCGTCGCCGCGTCCATCAAGTTCCCGA
                                acctgat  putative branch site (score: 4)
                                         ttgtatatat  TA-rich tract