1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gcaagtgcgctgtacggctagctagtttttccttcagagagattgatcgagatgtgacgatgccgctgccttggttgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGGCCCTCGTCAGCAGCGGTCGCACC
species | Zea mays |
transcript | GRMZM5G836250_T03 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|149064613|gb|EE286484.2|EE286484
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|149085230|gb|EE174737.2|EE174737
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|149056940|gb|EE156494.2|EE156494
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|33466970|gb|CF244019.1|CF244019
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|78106830|gb|DV525248.1|DV525248
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|148938587|gb|EC882914.2|EC882914
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|50327741|gb|CO522867.1|CO522867
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|89759142|gb|DY688055.1|DY688055
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|211007786|gb|FL012051.1|FL012051
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|149088446|gb|EE177549.2|EE177549
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|71314865|gb|DR794058.1|DR794058
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|149095912|gb|EE181574.2|EE181574
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|148983226|gb|EE029190.2|EE029190
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|71768089|gb|DR966026.1|DR966026
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|71770843|gb|DR968780.1|DR968780
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|148932776|gb|EE285437.2|EE285437
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|71317308|gb|DR795339.1|DR795339
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|211005021|gb|FL012048.1|FL012048
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|94476279|gb|EB705237.1|EB705237
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|91055488|gb|EB165906.1|EB165906
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|91877810|gb|EB407767.1|EB407767
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|149040104|gb|EE046754.2|EE046754
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|76282215|gb|DV021783.1|DV021783
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|74244032|gb|DT651946.1|DT651946
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|93284535|gb|EB676799.1|EB676799
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|37420508|gb|CF647945.1|CF647945
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGEST: gi|71438223|gb|DR819273.1|DR819273
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|78105897|gb|DV524315.1|DV524315
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|71757120|gb|DR955057.1|DR955057
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGEST: gi|78113532|gb|DV531923.1|DV531923
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
EST: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAG GGAGAGGAGCAGAAGAACCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
genomic: AGGCCGGGCTCGCCCAGCTCATCGGGCTCGCCGGCGAGACCAACGTGCAGgcaagtgcgc ... tgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAG
ccttcagagagattgatcgagatgtgacgatgccgctgccttggttgctcgacagGGAGAGGAGCAGAAGAAGCTGGACGTCCTGTCCAACGAGGTGTTCGTCAAGGCCCTCGTCAGCAGCGGTCGCACC
gattgat putative branch site (score: 110)