1 5' 3' | 2 5' 3' | 3 5' 3' |
gtatatatttaagtatgttctttttacattttatgctagttcctgattcctgtagtgtctggatagttatttcttggctgatacattgctctgatgtacctgtaaagttcactttgcttccttgtactatgatctaaacagctaacatctttgtgagactaaaaattacattttaaattggtgcagCTGGGAGACCTATCAGCCTGTTAGTGGCCTACTTGCACAACCTGAGTGGACTGTGTGGGACCAAACTGTTGAGTATTGTGCATTTGCTTATCAGCAGTAT
species | Zea mays |
transcript | GRMZM5G824843_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GATCCATTTTCCTCTAAGGAAGGGCCTCCACAAAATTTCCAACTGTACAG CTGGGAGACCTATCAGCCTGTTAGTGGCCTACTTGCACAACCTGAGTGGACEST: gi|71428569|gb|DR809619.1|DR809619
genomic: GATCCATTTTCCTCTAAGGAAGGGCCTCCACAAAATTTCCAACTGTACAGgtatatattt ... attggtgcagCTGGGAGACCTATCAGCCTGTTAGTGGCCTACTTGCACAACCTGAGTGGAC
EST: GATCCATTTTCCTCTAAGGAAGGGCCTCCACAAAATTTCCAACTGTACAG CTGGGAGACCTATCAGCCTGTTAGTGGCCTACTTGCACAACCTGAGTGGACEST: gi|211541871|gb|FL034147.1|FL034147
genomic: GATCCATTTTCCTCTAAGGAAGGGCCTCCACAAAATTTCCAACTGTACAGgtatatattt ... attggtgcagCTGGGAGACCTATCAGCCTGTTAGTGGCCTACTTGCACAACCTGAGTGGAC
EST: GATCCATTTTCCTCTAAGGAAGGGCCTCCACAAAATTTCCAACTGTACAG CTGGGAGACCTATCAGCCTGTTAGTGGCCTACTTGCACAACCTGAGTGGAC
genomic: GATCCATTTTCCTCTAAGGAAGGGCCTCCACAAAATTTCCAACTGTACAGgtatatattt ... attggtgcagCTGGGAGACCTATCAGCCTGTTAGTGGCCTACTTGCACAACCTGAGTGGAC
atctaaacagctaacatctttgtgagactaaaaattacattttaaattggtgcagCTGGGAGACCTATCAGCCTGTTAGTGGCCTACTTGCACAACCTGAGTGGACTGTGTGGGACCAAACTGTTGAGTATTGTGCATTTGCTTATCAGCAGTAT
gactaaa putative branch site (score: 66)
agactaaaaattacat TA-rich tract