1 5' 3' | 2 5' 3' |
gcatgtgcaagggaaggaagtttaagtcagtaaaacgaactgtcctgattacaaacacacaaacagatcacaaccagcagacattgttaatgacaaaagacagaattgcaatgagaatcaatacctGTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTTCTTGAACTTGTTGGGGAGGTAGTGCCTGGTCGACTTGTCAGAACCATAA
species | Zea mays |
transcript | GRMZM5G803927_T02 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TTGCGCTTCTTGGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCT GTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTTEST: gi|211530921|gb|FL079608.1|FL079608
genomic: TTGCGCTTCTTAGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCTgcatgtgcaa ... atcaatacctGTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTT
EST: TTGCGCTTCTTGGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCT GTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTTEST: gi|166571044|gb|EG154522.1|EG154522
genomic: TTGCGCTTCTTAGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCTgcatgtgcaa ... atcaatacctGTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTT
EST: GTTGTGAGCAATTTCAGCGCAGTAGGTCCT GTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTTEST: gi|9254539|gb|BE345007.1|BE345007
genomic: GTTGTGAGCAATTTCAGCGCAGTAGGTCCTgcatgtgcaa ... atcaatacctGTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTT
EST: TTGCGCTTCTTAGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCT GTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTTEST: gi|92088057|gb|EB484288.1|EB484288
genomic: TTGCGCTTCTTAGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCTgcatgtgcaa ... atcaatacctGTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTT
EST: TTGCGCTTCTTGGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCT GTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTTEST: gi|211044025|gb|FL231327.1|FL231327
genomic: TTGCGCTTCTTAGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCTgcatgtgcaa ... atcaatacctGTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTT
EST: TTGCGCTTCTTGGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCT GTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTTEST: gi|211285282|gb|FL231180.1|FL231180
genomic: TTGCGCTTCTTAGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCTgcatgtgcaa ... atcaatacctGTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTT
EST: TTGCGCTTCTTGGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCT GTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTTEST: gi|29130397|gb|CB381101.1|CB381101
genomic: TTGCGCTTCTTAGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCTgcatgtgcaa ... atcaatacctGTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTT
EST: TTGCGCTTCTTAGTGGACCCGTTGTGAGCAATTTCAGCGCAGTAGGTCCT GTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTTEST: gi|32911306|gb|CF016118.1|CF016118
genomic: TTGCGCTTCTTAGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCTgcatgtgcaa ... atcaatacctGTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTT
EST: TTGCGCTTCTTGGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCT GTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTT
genomic: TTGCGCTTCTTAGTGGACACGTTGTGAGCAATTTCAGCGCAGTAGGTCCTgcatgtgcaa ... atcaatacctGTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTT
aaccagcagacattgttaatgacaaaagacagaattgcaatgagaatcaatacctGTTGTGCATCATGAGCAACTCCAGCTCAGAAACGTTGTGGACCACAAACTTCTTGAACTTGTTGGGGAGGTAGTGCCTGGTCGACTTGTCAGAACCATAA
tgttaat putative branch site (score: 920)
attgttaat TA-rich tract