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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tcaatgccatgccatgatgcttgattattactactcgtataatagttgggtgttgtaataatgatgtgatactaacatacttctctcacccctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCCTAT

Basic information

species Zea mays
transcript GRMZM2G540538_T01
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G540538_T02 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os02g41590.1 (Oryza sativa), 3'ss of exon 1
----------tcaatgccatgccatgatgcttgattattactactcgtataatagttgggtgttgtaataatgatgtgatactaacatacttctctcacccctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCCTAT
          | ||||  ||||     | | ||||||||  |  |  |    || |  |||||  | |   |  ||  |   | || | ||||||  |    ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||
gtttactgctttaatgatatgctggagtacatgattatttatgttgct----tattatggtgtcatcacggt--tggcaatttgacgtgcttctccaa----tgttttagGTATGACGTCAAGCTGAACAATGCAATTCTCGCTGAGGAAAAGCACTTGCCTAT

upper sequence: GRMZM2G540538_T02 (Zea mays), 3'ss of exon 1
lower sequence: Vv13s0019g04470.t01 (Vitis vinifera), 3'ss of exon 1
-tcaatgcca-tgccatgatgcttgattattactactcgtataatagttgggtgttgtaataatgatgtgatactaacatacttctctcacccctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCCTAT
 | |||   | |    | ||  ||| || |||  |    | |  |  ||   ||||| | | || || || |   |   |     |  || |    |   || |||||||||||| |||| ||||||||||| |||||||| || |||||||| ||
cttaatatgaattttgttatatttgtttcttatgaagtttttgttcctttactgttgaatttatcatttggtg--actctgaaattaccagcgtgttaacagATATGACATCAAGTTGAATAATGCTATTCTTGCTGAGGACAAACACTTGCCCAT

upper sequence: GRMZM2G540538_T02 (Zea mays), 3'ss of exon 1
lower sequence: Vv13s0019g04480.t01 (Vitis vinifera), 3'ss of exon 1
tcaatgcca-tgccatgatgcttgattattactactcgtataatagttgggtgttgtaataatgatgtgatactaacatacttctctcacccctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCCTAT
| |||   | |    | ||  ||| ||  ||  |    | |  |  ||   ||||| | | || || || |        | ||  ||   |    |   || |||||||||||| |||| ||||||||||| |||||||| || |||||||| ||
ttaatatgaattttgtcatatttgtttcatatgaagtttttgttcctttactgttgaatttatcatttggtgactctgaaatta-ctgggcatgttaacagATATGACATCAAGTTGAATAATGCTATTCTTGCTGAGGACAAACACTTGCCCAT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9952767|gb|BE639350.1|BE639350
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211299293|gb|FK964182.1|FK964182
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|213175717|gb|FM182537.1|FM182537
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|28361646|gb|CB240002.1|CB240002
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211406117|gb|FK964261.1|FK964261
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211538004|gb|FL000878.1|FL000878
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211534999|gb|FL000868.1|FL000868
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|18649011|gb|BM497830.1|BM497830
EST:     CGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: CGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|60358287|gb|DN225260.1|DN225260
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211295007|gb|FK964152.1|FK964152
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|28931167|gb|CB334528.1|CB334528
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211297153|gb|FK964172.1|FK964172
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|71768280|gb|DR966217.1|DR966217
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211299292|gb|FK964181.1|FK964181
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211297154|gb|FK964173.1|FK964173
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211301432|gb|FK964199.1|FK964199
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211538003|gb|FL000877.1|FL000877
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211292867|gb|FK964139.1|FK964139
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|30031919|gb|CB833770.1|CB833770
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211406124|gb|FK964268.1|FK964268
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|67018775|gb|CO447524.1|CO447524
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211295014|gb|FK964159.1|FK964159
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|67020661|gb|CO449410.1|CO449410
EST:     TCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: TCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211403574|gb|FK964250.1|FK964250
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211403570|gb|FK964246.1|FK964246
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|30087102|gb|CB885310.1|CB885310
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|5555550|gb|AI881501.1|AI881501
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211303575|gb|FK964215.1|FK964215
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCKATTCTCGCTGAGGAGAAGCWCTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|19351360|gb|BM895892.1|BM895892
EST:     CCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGAC
genomic: CCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|18649868|gb|BM498687.1|BM498687
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211401016|gb|FK964225.1|FK964225
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211535006|gb|FL000875.1|FL000875
EST:     ACCCCCTCCTCGACATCKTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: ACCCCCTCCTCGACATC-TCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211301430|gb|FK964197.1|FK964197
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211411224|gb|FK964285.1|FK964285
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|67012632|gb|CO441381.1|CO441381
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|18649867|gb|BM498686.1|BM498686
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|26557766|gb|CA830001.1|CA830001
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211403564|gb|FK964240.1|FK964240
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|67028257|gb|CO457006.1|CO457006
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211408681|gb|FK964276.1|FK964276
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211408686|gb|FK964281.1|FK964281
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|18384280|gb|BM417479.1|BM417479
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCCAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|20811213|gb|BQ295691.1|BQ295691
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211403575|gb|FK964251.1|FK964251
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211301429|gb|FK964196.1|FK964196
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|13557954|gb|BG549310.1|BG549310
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|19436637|gb|BM953047.1|BM953047
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211295005|gb|FK964150.1|FK964150
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211303579|gb|FK964219.1|FK964219
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211406116|gb|FK964260.1|FK964260
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|26456972|gb|CA828555.1|CA828555
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211408679|gb|FK964274.1|FK964274
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211299298|gb|FK964187.1|FK964187
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211301441|gb|FK964208.1|FK964208
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|24773803|gb|CA409057.1|CA409057
EST:     AACCCCCTCCTCGACATCTCCGCCGCCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211401021|gb|FK964230.1|FK964230
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|28361834|gb|CB240190.1|CB240190
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|8367104|gb|BE050049.1|BE050049
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211403569|gb|FK964245.1|FK964245
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|40335337|gb|CK369407.1|CK369407
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211403566|gb|FK964242.1|FK964242
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|67024289|gb|CO453038.1|CO453038
EST:     AACCCCCTCCTCGACATCTCCGCCGGCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|60355538|gb|DN222511.1|DN222511
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211295016|gb|FK964161.1|FK964161
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211295008|gb|FK964153.1|FK964153
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211303574|gb|FK964214.1|FK964214
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|18384281|gb|BM417480.1|BM417480
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211299303|gb|FK964192.1|FK964192
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|24961588|gb|CA483591.1|CA483591
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211406111|gb|FK964255.1|FK964255
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|67022396|gb|CO451145.1|CO451145
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211406113|gb|FK964257.1|FK964257
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211406118|gb|FK964262.1|FK964262
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|13562186|gb|BG550406.1|BG550406
EST:     ACCCCCTTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTTCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGTTATGCACTTGCC
genomic: ACCCCC-TCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211295004|gb|FK964149.1|FK964149
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|9953243|gb|BE639826.1|BE639826
EST:     CATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
genomic: CATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC
EST: gi|211535002|gb|FL000871.1|FL000871
EST:     AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAA                         GTATGACATCAAGCTGAACAATGCCATTCTCGCTGAGGAGAAGCACTTGCC
genomic: AACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 534

GGAGAAGAGAGGAAATGGCGGCGACCGAGGGCGTGCTCCTGGGGATGGGCAACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCCTAT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 754

GGAGAAGAGAGGAAATGGCGGCGACCGAGGGCGTGCTCCTGGGGATGGGCAACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCCTAT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 979

GGAGAAGAGAGGAAATGGCGGCGACCGAGGGCGTGCTCCTGGGGATGGGCAACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCCTAT


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 906

GGAGAAGAGAGGAAATGGCGGCGACCGAGGGCGTGCTCCTGGGGATGGGCAACCCCCTCCTCGACATCTCCGCCGTCGTCGATGACGCCTTCCTGACAAAgtaagcggtc ... cctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCCTAT




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttgggtgttgtaataatgatgtgatactaacatacttctctcacccctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCCTAT
                                tacttctctcacccct  CT-rich tract
       ttgtaataat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tcaatgccatgccatgatgcttgattattactactcgtataatagttgggtgttgtaataatgatgtgatactaacatacttctctcacccctgttttagGTATGACATCAAGCTGAACAATGCTATTCTCGCTGAGGAGAAGCACTTGCCTAT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC