1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtacgcgtgccgcccggcccgacctccttcgcgcaattggggtctcgccgcttccgtgggggtttcgccgcttcgcttttgcccgctcactcgctagggttttagatctcccatgcgactgcttggtccccgcgcttgctaaccgtagttttggcgtggatgctttcgcagAGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGAAGCTTCCGGAGCGGCCGGGCGAGGCGGACTGCACCTACTACCTCCGCAC
species | Zea mays |
transcript | GRMZM2G475017_T03 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAG AGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGAEST: gi|91876225|gb|EB406182.1|EB406182
genomic: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAGgtacgcgtgc ... gctttcgcagAGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGA
EST: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAG AGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGAEST: gi|94474028|gb|EB702986.1|EB702986
genomic: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAGgtacgcgtgc ... gctttcgcagAGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGA
EST: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAG AGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGAEST: gi|76921023|gb|DV168420.1|DV168420
genomic: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAGgtacgcgtgc ... gctttcgcagAGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGA
EST: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAG AGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGAEST: gi|71775279|gb|DR973157.1|DR973157
genomic: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAGgtacgcgtgc ... gctttcgcagAGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGA
EST: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAG AGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGAEST: gi|38687417|gb|CK144448.1|CK144448
genomic: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAGgtacgcgtgc ... gctttcgcagAGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGA
EST: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAG AGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGAEST: gi|76289471|gb|DV029039.1|DV029039
genomic: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAGgtacgcgtgc ... gctttcgcagAGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGA
EST: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAG AGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGAEST: gi|37425824|gb|CF650661.1|CF650661
genomic: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAGgtacgcgtgc ... gctttcgcagAGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGA
EST: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAG AGTCGATGCGGAAGCTGGGGCTCGGCGAGGACTACAAAGCGGGGGAGGAGAEST: gi|50338849|gb|CO533975.1|CO533975
genomic: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAGgtacgcgtgc ... gctttcgcagAGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGA
EST: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAG AGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGA
genomic: GTACGCGGCGACGAAGGGCGGCGAGTCCGACGCCGGCACCGGCCTGGAAGgtacgcgtgc ... gctttcgcagAGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGA
gactgcttggtccccgcgcttgctaaccgtagttttggcgtggatgctttcgcagAGTCGATGCGGAAGCTGGGGCTCGGCGAGGACGACGAAGCGGGGGAGGAGAAGCTTCCGGAGCGGCCGGGCGAGGCGGACTGCACCTACTACCTCCGCAC
tgctaac putative branch site (score: 1)
tgctttc putative PPT
tagtttt TA-rich tract