Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtctgtctctctctctctttcagtaatccctcccattcatgcgcacaccatcctcgtatgcgtacgcacgagcgcattgcgtcagtaatgaacacgcacgcatgctctgctgtgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGGTTCCCTATGGCGTTCACGGCGACGCTCATGTCGTGGGGCCTGATCGACT

Basic information

species Zea mays
transcript GRMZM2G455642_T02
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G455642_T02 (Zea mays), 3'ss of exon 1
lower sequence: GLYMA08G04840.1 (Glycine max), 3'ss of exon 1
gtctgtctctctctctctttcagtaatccctcccattcatgcgcacaccatcctcgtatgcgtacgca---cgagcgc-attgcgtcagtaatgaac-acgcacgcatgctctgctgtgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGGTTCCCTATGGCGTTCACGGCGACGCTCATGTCGTGGGGCCTGATCGACT
                                       |  |       | ||  ||||   | | |    ||  |  | |  |    | || ||  | | | |||   | || |||  ||| ||||||||| |||  || |||||||||||||| || || ||| | ||||||||||| || |||||||||||| ||||| |  |||||||| || ||||||| |
--------------------------------------gtaagtttcttgttctgttatgaaaatgtagattgatagagaatatgatgatgattaatgaggtaggcacattgtgttgtttact-cagGTGGACTTGAGTGGAGGGTACTACGACGCCGGGGATAACATAAAGTTCGGGTTTCCGATGGCGTTCACGACGACGATGCTGTCGTGGAGCGTGATCGATT

upper sequence: GRMZM2G455642_T02 (Zea mays), 3'ss of exon 1
lower sequence: GLYMA05G34850.1 (Glycine max), 3'ss of exon 1
gtctgtctctctctctctttcagtaatccctcccattcatgcgcacaccatcctcgtatgcgtacgcacgagcgcattgcgtcagtaatgaacacgcacgcatgctctgctgtgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGGTTCCCTATGGCGTTCACGGCGACGCTCATGTCGTGGGGCCTGATCGACT
                      ||||    | |  ||             | || | | | |||      || | |     | | ||||||    |   | |   | || | |   || ||||||||| |||  || |||||||||||||| || |||||| | ||||||||||| || ||||||||| || ||||  |  |||||||| || ||||||| |
----------------------gtaagtttttctgttt----------tgttct-gaaagggtaataggtagagaaaatgatgattaatgag---gttggtacattgtgtttttttct-cagGTGGACTTGAGCGGAGGGTACTACGACGCCGGGGACAACATAAAGTTCGGGTTTCCGATGGCGTTCTCGACGACAATGCTGTCGTGGAGCGTGATCGATT

upper sequence: GRMZM2G455642_T02 (Zea mays), 3'ss of exon 1
lower sequence: PP1S376_19V6.1 (Physcomitrella patens), 3'ss of exon 1
-------------------------gtctgtctctctctctctttcagtaatccctccc---attcatgcgcacaccatcctcgtatgcgtacgcacgagcgcattgcgtcagtaatgaacacgcacgcatgctctgctgtgcact---gcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGGTTCCCTATGGCGTTCACGGCGACGCTCATGTCGTGGGGCCTGATCGACT
                         ||             |    ||| |||  |       ||||||| ||       | |  ||| ||       |  | |  |||   | |  | || |   ||     |  || ||  | ||   |||||| ||  |||  || ||||||||||||||||| |||||||| ||||||||| | || ||||| ||||  |   |  |  |||| |||||   | | || |
gtatgctaaatagattcttccagaagtagaggcagaaactttacgcagcaatttcattgcaaattcatgtgcctgtacactttttatccgcgaaattggac-ctctgctgaaattgtaaa-attgaccttgacgatggtggactcttgtgcagGTTGATTTGAGTGGAGGGTACTACGACGCGGGAGACAACGTTAAGTTCGGGCTTCCAATGGCATTCAGCGTCTCCATGTTGTCTTGGGGAGCGGTGGAGT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|78075629|gb|DV504063.1|DV504063
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71446716|gb|DR827766.1|DR827766
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGA                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71328298|gb|DR800779.1|DR800779
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71436883|gb|DR817933.1|DR817933
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71331405|gb|DR802539.1|DR802539
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|78084355|gb|DV512748.1|DV512748
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|91051712|gb|EB162130.1|EB162130
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|149088725|gb|EE177848.2|EE177848
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|88755755|gb|DY539896.1|DY539896
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|94476109|gb|EB705067.1|EB705067
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71443460|gb|DR824510.1|DR824510
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|149098615|gb|EE184619.2|EE184619
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|93012895|gb|EB638415.1|EB638415
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|50326493|gb|CO521619.1|CO521619
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|76914902|gb|DV165752.1|DV165752
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71429690|gb|DR810740.1|DR810740
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71437805|gb|DR818855.1|DR818855
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|50338096|gb|CO533222.1|CO533222
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71438274|gb|DR819324.1|DR819324
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|91054158|gb|EB164576.1|EB164576
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|148948565|gb|EC894090.2|EC894090
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|78115534|gb|DV533922.1|DV533922
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|74244514|gb|DT652428.1|DT652428
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71332166|gb|DR802998.1|DR802998
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71328963|gb|DR801168.1|DR801168
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71445660|gb|DR826710.1|DR826710
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71772571|gb|DR970502.1|DR970502
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71768781|gb|DR966718.1|DR966718
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|101388385|gb|EB816180.1|EB816180
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|91876674|gb|EB406631.1|EB406631
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71441693|gb|DR831409.1|DR831409
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGA                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|78115548|gb|DV533936.1|DV533936
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGA                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|78084555|gb|DV512948.1|DV512948
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71447476|gb|DR828526.1|DR828526
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|78121988|gb|DV540372.1|DV540372
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71441836|gb|DR822886.1|DR822886
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|74244948|gb|DT652862.1|DT652862
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|76922095|gb|DV168847.1|DV168847
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|74235047|gb|DT642961.1|DT642961
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71328589|gb|DR800957.1|DR800957
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|91048893|gb|EB159311.1|EB159311
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|76293850|gb|DV033418.1|DV033418
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71433678|gb|DR814728.1|DR814728
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|76285714|gb|DV025282.1|DV025282
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|148995155|gb|EE034435.2|EE034435
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71331607|gb|DR802646.1|DR802646
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|149044889|gb|EE047692.2|EE047692
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71442648|gb|DR823698.1|DR823698
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71332955|gb|DR803506.1|DR803506
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|78079502|gb|DV507914.1|DV507914
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|74244917|gb|DT652831.1|DT652831
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71433868|gb|DR814918.1|DR814918
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|71320063|gb|DR796790.1|DR796790
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|101385542|gb|EB814818.1|EB814818
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|91877547|gb|EB407504.1|EB407504
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|78114026|gb|DV532415.1|DV532415
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|101383157|gb|EB813633.1|EB813633
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|91048960|gb|EB159378.1|EB159378
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
EST: gi|148969632|gb|EE020485.2|EE020485
EST:     GGCAGGACTCGGCCATCCACGACGGCGCCGA------GG--C-G--GGG-                         GTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG
genomic: GGCAGGACTCGGCCATCCACGACGGCGCCGAGGCGGGGGTACGGACGGGAgtctgtctct ... tgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

acgagcgcattgcgtcagtaatgaacacgcacgcatgctctgctgtgcactgcagGTGGACCTGACGGGCGGGTACTACGACGCGGGCGACAACGTGAAGTTCGGGTTCCCTATGGCGTTCACGGCGACGCTCATGTCGTGGGGCCTGATCGACT
                  taatgaa  TA-rich tract