1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaagcctcccccggcctcgtcgcccccctcctccccgttcgcgcctctcgatttggtggctccgcggaccgcggtaagctcagcggctgattagggcggtgtcgcccctggctgctgttgctgggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGGGAGCGAGGCATCACGCCGGAAGAGTTCCGCCTCATCAAGATCCATATG
species | Zea mays |
transcript | GRMZM2G408242_T03 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116525|gb|FL229714.1|FL229714
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|88748070|gb|DY532211.1|DY532211
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCATCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115736|gb|FL229707.1|FL229707
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGT-CACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115731|gb|FL229702.1|FL229702
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGT-CACNATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGC-GSGGACCGEST: gi|211117332|gb|FL229741.1|FL229741
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCAACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCT-GACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115739|gb|FL229710.1|FL229710
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116530|gb|FL229719.1|FL229719
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115740|gb|FL229711.1|FL229711
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116529|gb|FL229718.1|FL229718
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211117322|gb|FL229731.1|FL229731
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116535|gb|FL229724.1|FL229724
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116537|gb|FL229726.1|FL229726
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211117328|gb|FL229737.1|FL229737
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116524|gb|FL229713.1|FL229713
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCCTGGTGCCGGCGGCGGAACEST: gi|211117330|gb|FL229739.1|FL229739
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACC-TGGTGCCGGCGGCGGACC
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGAACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116528|gb|FL229717.1|FL229717
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGT-CACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCT-GACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|18650040|gb|BM498859.1|BM498859
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116534|gb|FL229723.1|FL229723
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGT-CACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|22818772|gb|BU498862.1|BU498862
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|17970138|gb|BM276903.1|BM276903
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|5325108|gb|AI783299.1|AI783299
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|19822800|gb|BQ048824.1|BQ048824
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116533|gb|FL229722.1|FL229722
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115728|gb|FL229699.1|FL229699
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGT-CACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211117326|gb|FL229735.1|FL229735
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211114947|gb|FL229695.1|FL229695
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGT-CACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCTGCGGCGGACCGEST: gi|211116532|gb|FL229721.1|FL229721
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115733|gb|FL229704.1|FL229704
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116531|gb|FL229720.1|FL229720
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211117318|gb|FL229727.1|FL229727
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|74235410|gb|DT643324.1|DT643324
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115727|gb|FL229698.1|FL229698
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|50333682|gb|CO528808.1|CO528808
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211117324|gb|FL229733.1|FL229733
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211117325|gb|FL229734.1|FL229734
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|6020447|gb|AW065375.1|AW065375
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211117323|gb|FL229732.1|FL229732
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|149084617|gb|EE174095.2|EE174095
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211117321|gb|FL229730.1|FL229730
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGT-CACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGC-GSGGACCGEST: gi|211115734|gb|FL229705.1|FL229705
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115735|gb|FL229706.1|FL229706
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGT-CACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCT-GACCCCGAGGACGTGGACCTGGTGCCGGC-GSGGACCGEST: gi|148990759|gb|EE032170.2|EE032170
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|93015766|gb|EB641286.1|EB641286
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCGGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115729|gb|FL229700.1|FL229700
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211114948|gb|FL229696.1|FL229696
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGT-CACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGC-GSGGACCGEST: gi|26456727|gb|CA828310.1|CA828310
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|20803321|gb|BQ294371.1|BQ294371
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: GGGACCGCGGGTCCACGATGGCCGCTCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115737|gb|FL229708.1|FL229708
genomic: GGGACCGCGGGTCCACGATGGCCGC-CAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|22521612|gb|BU080423.1|BU080423
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115732|gb|FL229703.1|FL229703
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115730|gb|FL229701.1|FL229701
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211117331|gb|FL229740.1|FL229740
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211114945|gb|FL229693.1|FL229693
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGT-CACGATRGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCACGGCGGCGGACCEST: gi|211117319|gb|FL229728.1|FL229728
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGC-CGGCGGCGGACC
EST: CGGGACCGCGGGT-CACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCT-GACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116526|gb|FL229715.1|FL229715
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211115726|gb|FL229697.1|FL229697
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211117329|gb|FL229738.1|FL229738
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|148937775|gb|EC881986.2|EC881986
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGEST: gi|211116527|gb|FL229716.1|FL229716
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
EST: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTG CAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
genomic: CGGGACCGCGGGTCCACGATGGCCGCCAACTTCTGGACGTCGTCGCACTGgtaagcctcc ... ggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCG
ctcagcggctgattagggcggtgtcgcccctggctgctgttgctgggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGGGAGCGAGGCATCACGCCGGAAGAGTTCCGCCTCATCAAGATCCATATG
ggctgat putative branch site (score: 141)
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagcctcccccggcctcgtcgcccccctcctccccgttcgcgcctctcgatttggtggctccgcggaccgcggtaagctcagcggctgattagggcggtgtcgcccctggctgctgttgctgggatgtgcagCAAGCAGCTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGGGAGCGAGGCATCACGCCGGAAGAGTTCCGCCTCATCAAGATCCATATG
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