Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...actaagtcaaatgttccgcattagcttgcaacccaaagtcttccgcagatagtaatgatatacggaatatcacatttggcagttgatattgattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAGGAAGAACAACTCCTTCCTTGTGAAGCAGTTCGGCAACGGCAATGCCAAG

Basic information

species Zea mays
transcript GRMZM2G394827_T02
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G394827_T02 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os05g46430.2 (Oryza sativa), 3'ss of exon 1
actaagtcaaatgttccgcattagc--ttgcaacccaaagtc---ttccgcagatagtaatgatatacggaatatcacatttggcagttgatattgattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAGGAAGAACAACTCCTTCCTTGTGAAGCAGTTCGGCAACGGCAATGCCAAG
     | |||||||| ||   ||    |   |       |||   ||   | | |  | || |  ||| | || | ||| | ||  |||| | ||| |||| ||||||||| |||||||| || ||||| | |  | |||||||| || |||| | ||||||||||| |||||| |||||||||||||| ||  |||||||||||
-----ggcaaatgttgcgttataataatcatatatatgggtcactttttcctgctgatcattagttacaggatcttacagtaggttgttggttttggttatgtagGCGAAGCGAAATGGCGACGGTTCCGGAGCCTTTGATCTGGGAGATTGTCAAGAAGAACAACTGCTTCCTGGTGAAGCAGTTCGGGAATAGCAATGCCAAG

upper sequence: GRMZM2G394827_T02 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os02g57540.1 (Oryza sativa), 3'ss of exon 1
actaagtcaaatgttccgcattagctt-gcaacccaa-agtcttccgcagatagtaatgatatacggaatatcacatttggcagttgatattgattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAGGAAGAACAACTCCTTCCTTGTGAAGCAGTTCGGCAACGGCAATGCCAAG
  |    | |  |||  | | |   || ||     ||  |||       | |   |  |  ||  |  ||     | | | |  |   | ||| | || |||    || |||||||| || ||||| | |  | || ||||| || |||||| ||||||||||| |||||| ||||||||||| || ||| |||||||||||
-ttgctgccagcgttgtgtaatgtttttgcgtgttaatggtcacttagtggtctgatggtcatttgctatggtgtaatggtcgatctgt-ttggtgatgtagCTACAGCGAAATGGCGACGGTTCCGGAGCCTTTGTTCTGGGAGATTGTGAAGAAGAACAACTGCTTCCTCGTGAAGCAGTTTGGAAACAGCAATGCCAAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211296829|gb|FL396158.1|FL396158
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211233830|gb|FL389693.1|FL389693
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACG-CGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211497205|gb|FL423876.1|FL423876
EST:     ACCTCAACCCAGGAACAGAGCGAGGCGACG-CGCGGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: ACCTCAACCCAGGAACAGAGCGAGGCGACGCCGC-GGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211176026|gb|FL375094.1|FL375094
EST:     CACCTCAACCKDGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60359253|gb|DN226226.1|DN226226
EST:     CCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211154939|gb|FL392736.1|FL392736
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|67023266|gb|CO452015.1|CO452015
EST:     CGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGCTGGG-AATGGCAACCGTTCCA-GGGATCTGATCTGGCAGGTTGTGAG
genomic: CGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211099998|gb|FL395937.1|FL395937
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|30306771|gb|CD001444.1|CD001444
EST:     CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|76937181|gb|DV175072.1|DV175072
EST:     CCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211513363|gb|FL375311.1|FL375311
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGYGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60395962|gb|DN228832.1|DN228832
EST:     CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|76018118|gb|DT945288.1|DT945288
EST:     CAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|88753037|gb|DY537178.1|DY537178
EST:     GCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: GCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211261886|gb|FL409715.1|FL409715
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGGG                        
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCC--Ggtaagtgaga ... gattattta
EST: gi|84970269|gb|DW468619.1|DW468619
EST:     CCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATTTGGCAGGTTGTGAG
genomic: CCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|5439442|gb|AI820363.1|AI820363
EST:     GAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: GAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211358242|gb|FL402303.1|FL402303
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211227635|gb|FL389646.1|FL389646
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211184986|gb|FL404788.1|FL404788
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|32858030|gb|CD997711.1|CD997711
EST:     CACCCCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|28910539|gb|CB331489.1|CB331489
EST:     TCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: TCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|76283606|gb|DV023174.1|DV023174
EST:     CAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211309816|gb|FL427595.1|FL427595
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACG-CGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211530413|gb|FL405501.1|FL405501
EST:     SACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|213172099|gb|FM194992.1|FM194992
EST:     AGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: AGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211311532|gb|FL415340.1|FL415340
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211243149|gb|FL405268.1|FL405268
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACG-CGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60350633|gb|DN217606.1|DN217606
EST:     CCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211341213|gb|FL389719.1|FL389719
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60356087|gb|DN223060.1|DN223060
EST:     CCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211385047|gb|FL404093.1|FL404093
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|42491789|gb|CK700835.1|CK700835
EST:     GGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: GGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|84976891|gb|DW475313.1|DW475313
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60338468|gb|DN205441.1|DN205441
EST:     ACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: ACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|67026694|gb|CO455443.1|CO455443
EST:     CACCCCATCCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|9732819|gb|BE511571.1|BE511571
EST:     CGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|5455883|gb|AI833573.1|AI833573
EST:     CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|76913926|gb|DV165327.1|DV165327
EST:     GCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: GCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211441963|gb|FL416334.1|FL416334
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|67016978|gb|CO445727.1|CO445727
EST:     CGACGCCTTGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|74241859|gb|DT649773.1|DT649773
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211498792|gb|FL369829.1|FL369829
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60345472|gb|DN212445.1|DN212445
EST:     GCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: GCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211400235|gb|FL372538.1|FL372538
EST:     ACCTCAACCCAGG-CCTTTAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: ACCTCAACCCAGGAAC-AGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211277461|gb|FL423583.1|FL423583
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCYTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60394141|gb|DN227011.1|DN227011
EST:     CAGGAACAAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CAGGAAC-AGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|76011773|gb|DT938943.1|DT938943
EST:     CAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211128401|gb|FL407362.1|FL407362
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACG-CGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60396546|gb|DN229415.1|DN229415
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|30087280|gb|CB885488.1|CB885488
EST:     CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211429415|gb|FL420681.1|FL420681
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACG-CGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60354481|gb|DN221454.1|DN221454
EST:     AGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: AGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211327528|gb|FL370111.1|FL370111
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACG-CGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|67032774|gb|CO461523.1|CO461523
EST:     CAACCCAGTTACCGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCACGGGATCTGATCTGGCAGGTTGTGAG
genomic: CAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|50329125|gb|CO524251.1|CO524251
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|32915457|gb|CF020269.1|CF020269
EST:     CACCCCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|67024710|gb|CO453459.1|CO453459
EST:     CAACCCAGGTAACCGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CAACCCAGG-AACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211239641|gb|FL451454.1|FL451454
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCT-C-                         -C---GGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|30306772|gb|CD001445.1|CD001445
EST:     CCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60349877|gb|DN216850.1|DN216850
EST:     GAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: GAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|32937425|gb|CF042244.1|CF042244
EST:     CACCCCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTC-TCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|28910252|gb|CB331346.1|CB331346
EST:     ACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         G-GAAGGGCAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGA
genomic: ACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGG-AAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGA
EST: gi|32935094|gb|CF039906.1|CF039906
EST:     CACCCCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211059951|gb|FL385580.1|FL385580
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211539521|gb|FL409051.1|FL409051
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211317019|gb|FL374757.1|FL374757
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211261884|gb|FL409713.1|FL409713
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|76018117|gb|DT945287.1|DT945287
EST:     CAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211536633|gb|FL412555.1|FL412555
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211048382|gb|FL399867.1|FL399867
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCTTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|50323417|gb|CO518543.1|CO518543
EST:     CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211053915|gb|FL383318.1|FL383318
EST:     GAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCGACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: GAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211428471|gb|FL372123.1|FL372123
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|32908522|gb|CF013335.1|CF013335
EST:     CACCCCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|116815202|gb|EC857856.1|EC857856
EST:     CCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCA-GGGATCTGATCTGGCAGGTTGTGAG
genomic: CCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211501632|gb|FL378773.1|FL378773
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCA-CTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211020330|gb|FL416079.1|FL416079
EST:     ACCTCAACCCAGGAACAGAGCGAGGCGACG-CGCGGNCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: ACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGG-CACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|32944537|gb|CF049356.1|CF049356
EST:     CACCCCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCCCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCGGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|71421268|gb|DR805365.1|DR805365
EST:     CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211357907|gb|FL386194.1|FL386194
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGAATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|29130658|gb|CB381362.1|CB381362
EST:     TCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: TCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|15589439|gb|BI674055.1|BI674055
EST:     AGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: AGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60358531|gb|DN225504.1|DN225504
EST:     GGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: GGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60341275|gb|DN208248.1|DN208248
EST:     GGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: GGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211019622|gb|FL388979.1|FL388979
EST:     AGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: AGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|31405927|gb|CD484659.1|CD484659
EST:     CCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211071746|gb|FL413441.1|FL413441
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211106641|gb|FL406858.1|FL406858
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211229480|gb|FL370974.1|FL370974
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACG-CGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|4887512|gb|AI677611.1|AI677611
EST:     C-CCTCAACCCAGG-ACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|9254196|gb|BE344664.1|BE344664
EST:     GGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: GGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|32856028|gb|CD995709.1|CD995709
EST:     CACCCCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60357910|gb|DN224883.1|DN224883
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211521192|gb|FL395747.1|FL395747
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|29946968|gb|CB816416.1|CB816416
EST:     CAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGG-AGGTTGTGAG
genomic: CAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|211336609|gb|FL398406.1|FL398406
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACG-CGCGGCACCTCTTCTCCG                         GCGARGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|29946219|gb|CB816039.1|CB816039
EST:     CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|32864819|gb|CF004501.1|CF004501
EST:     CACCCCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|60351047|gb|DN218020.1|DN218020
EST:     CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CACCTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|31909341|gb|CD650870.1|CD650870
EST:     CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: CTCAACCCAGGAACAGAGCGAGGCGACGCCGCGGCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
EST: gi|30087281|gb|CB885489.1|CB885489
EST:     GCACCTCTTCTCCG                         GCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG
genomic: GCACCTCTTCTCCGgtaagtgaga ... gattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cagatagtaatgatatacggaatatcacatttggcagttgatattgattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAGGAAGAACAACTCCTTCCTTGTGAAGCAGTTCGGCAACGGCAATGCCAAG
                                         tattgat  putative branch site (score: 3)
                                     ttgatattgattattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
actaagtcaaatgttccgcattagcttgcaacccaaagtcttccgcagatagtaatgatatacggaatatcacatttggcagttgatattgattatttagGCGAAGGGAAATGGCAACCGTTCCAGGGGATCTGATCTGGCAGGTTGTGAGGAAGAACAACTCCTTCCTTGTGAAGCAGTTCGGCAACGGCAATGCCAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC