1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtgcgtacgcatcgcgccatcgccacatggctctcgccctctgtgtttttttaattatatattttctcttgaattcgtgcgatttgacttggtttcggcctcgttttttgcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
species | Zea mays |
transcript | GRMZM2G361074_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|71426824|gb|DR807874.1|DR807874
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307131|gb|FL162129.1|FL162129
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|78085341|gb|DV513734.1|DV513734
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|148950950|gb|EC896587.2|EC896587
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307122|gb|FL162120.1|FL162120
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211196752|gb|FL162102.1|FL162102
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|84979967|gb|DW530316.1|DW530316
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|33770787|gb|CF273081.1|CF273081
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|28187952|gb|CB179562.1|CB179562
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTEST: gi|211305102|gb|FL162107.1|FL162107
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211309155|gb|FL162139.1|FL162139
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|116823511|gb|EC867051.1|EC867051
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307127|gb|FL162125.1|FL162125
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211305104|gb|FL162109.1|FL162109
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211305105|gb|FL162110.1|FL162110
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307126|gb|FL162124.1|FL162124
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|76294370|gb|DV033938.1|DV033938
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307136|gb|FL162134.1|FL162134
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|28188123|gb|CB179733.1|CB179733
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|71426825|gb|DR807875.1|DR807875
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|32912934|gb|CF017746.1|CF017746
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307124|gb|FL162122.1|FL162122
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|149085569|gb|EE175081.2|EE175081
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|78081690|gb|DV510102.1|DV510102
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211309154|gb|FL162138.1|FL162138
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211305110|gb|FL162115.1|FL162115
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTWCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211305106|gb|FL162111.1|FL162111
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGATATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307132|gb|FL162130.1|FL162130
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211305100|gb|FL162105.1|FL162105
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211309153|gb|FL162137.1|FL162137
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211196753|gb|FL162103.1|FL162103
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|76908744|gb|DV163077.1|DV163077
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: ACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|37622025|gb|CF675078.1|CF675078
genomic: ACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|28187964|gb|CB179574.1|CB179574
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAGCTGCGCCATCTGCCGCGACCACATCATGGACCTTTEST: gi|211305109|gb|FL162114.1|FL162114
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307128|gb|FL162126.1|FL162126
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307135|gb|FL162133.1|FL162133
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211305101|gb|FL162106.1|FL162106
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATTGACCTTTEST: gi|28188239|gb|CB179849.1|CB179849
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307123|gb|FL162121.1|FL162121
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGWTCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|161591204|gb|EY959415.1|EY959415
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCEST: gi|32915004|gb|CF019816.1|CF019816
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGC
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|101389549|gb|EB816709.1|EB816709
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: GAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211309151|gb|FL162135.1|FL162135
genomic: GAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|60395946|gb|DN228816.1|DN228816
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|4827489|gb|AI668181.1|AI668181
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211305113|gb|FL162118.1|FL162118
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307133|gb|FL162131.1|FL162131
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|9952798|gb|BE639381.1|BE639381
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211307129|gb|FL162127.1|FL162127
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|78026763|gb|DV495150.1|DV495150
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211305114|gb|FL162119.1|FL162119
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGSCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211305112|gb|FL162117.1|FL162117
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211309152|gb|FL162136.1|FL162136
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|37375689|gb|CF624299.1|CF624299
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTTEST: gi|211305111|gb|FL162116.1|FL162116
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
EST: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGG ACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
genomic: CAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCTCTCTCTGGGCCTGGGgtgcgtacgc ... gcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
tctcttgaattcgtgcgatttgacttggtttcggcctcgttttttgcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
atttgac putative branch site (score: 186)
ttttttgc putative PPT
tttttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgcgtacgcatcgcgccatcgccacatggctctcgccctctgtgtttttttaattatatattttctcttgaattcgtgcgatttgacttggtttcggcctcgttttttgcgcccgcagACATCGTGGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA