1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...atgttttttgtttgttgttcttggtaaaactgcatatgtagcatagaatttgttgccatatcttgtcactaattcacatctttggtacttaattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACACAACTGCTGGAGACGGAACTGGGGGAGAGTCAATTTATGGGTCCAAAT
species | Zea mays |
transcript | GRMZM2G329306_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115909|gb|FL138990.1|FL138990
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTT-ATGATTCAAGGGGGAGACEST: gi|211116702|gb|FL139000.1|FL139000
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211116709|gb|FL139007.1|FL139007
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115905|gb|FL138986.1|FL138986
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|76931844|gb|DV172871.1|DV172871
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|149081859|gb|EE171017.2|EE171017
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115914|gb|FL138995.1|FL138995
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115911|gb|FL138992.1|FL138992
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115910|gb|FL138991.1|FL138991
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115903|gb|FL138984.1|FL138984
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|148991225|gb|EE032690.2|EE032690
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|9566471|gb|BE475980.1|BE475980
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211116705|gb|FL139003.1|FL139003
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115913|gb|FL138994.1|FL138994
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211116703|gb|FL139001.1|FL139001
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|149051835|gb|EE155962.2|EE155962
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115906|gb|FL138987.1|FL138987
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211116710|gb|FL139008.1|FL139008
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTT-AAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115915|gb|FL138996.1|FL138996
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|91875475|gb|EB405432.1|EB405432
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211116707|gb|FL139005.1|FL139005
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115912|gb|FL138993.1|FL138993
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCMAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|148956138|gb|EC901909.2|EC901909
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211117495|gb|FL139014.1|FL139014
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211116711|gb|FL139009.1|FL139009
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTACGAYTCAAGGGGGAGACEST: gi|211116701|gb|FL138999.1|FL138999
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGANACEST: gi|211116713|gb|FL139011.1|FL139011
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGARAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAEST: gi|211116708|gb|FL139006.1|FL139006
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAA
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115908|gb|FL138989.1|FL138989
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|32865832|gb|CF005514.1|CF005514
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: TCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAEST: gi|93284502|gb|EB676766.1|EB676766
genomic: TCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATG-CTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGA
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|149097483|gb|EE183354.2|EE183354
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211199272|gb|FL277459.1|FL277459
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGC-AGCGGCAAGCCGCTTCACTTGARG GGCTCATGCTTCCACCGTGEST: gi|211482025|gb|FL049376.1|FL049376
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTG
EST: AGGGGAGAAAGGCATCGGCGCCGCCAGCGGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAEST: gi|71329029|gb|DR801214.1|DR801214
genomic: AGGGGAGAAAGGCATCGGCGCCGCCAGCGG-CAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGA
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|76017868|gb|DT945038.1|DT945038
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|18383760|gb|BM416960.1|BM416960
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: AAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCAC-TTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|149080490|gb|EE169521.2|EE169521
genomic: AAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211116712|gb|FL139010.1|FL139010
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|78083683|gb|DV512076.1|DV512076
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115916|gb|FL138997.1|FL138997
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211116715|gb|FL139013.1|FL139013
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGWGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGACTCAAGGGGGAGACEST: gi|148963888|gb|EE014998.2|EE014998
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211116704|gb|FL139002.1|FL139002
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211115904|gb|FL138985.1|FL138985
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|211117496|gb|FL139015.1|FL139015
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|71443879|gb|DR824929.1|DR824929
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|149012519|gb|EE042587.2|EE042587
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACEST: gi|78090325|gb|DV518699.1|DV518699
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
EST: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAG GGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
genomic: CAGGGGAGAAAGGCATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGgttcgatcca ... aattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGAC
gaatttgttgccatatcttgtcactaattcacatctttggtacttaattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACACAACTGCTGGAGACGGAACTGGGGGAGAGTCAATTTATGGGTCCAAAT
tttttt CT-rich tract
tacttaatttttta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| atgttttttgtttgttgttcttggtaaaactgcatatgtagcatagaatttgttgccatatcttgtcactaattcacatctttggtacttaattttttagGGCTCATGCTTCCACCGTGTTATTAAAGGGTTTATGATTCAAGGGGGAGACACAACTGCTGGAGACGGAACTGGGGGAGAGTCAATTTATGGGTCCAAAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
-tgttttt
- - - - tgtttgt
- - - - - - - - gttcttg
- - - - - - - - - - - - - - -ctgcata
- - - - - - - - - - - - - - - - - - tgtagca
- - - - - - - - - - - - - - - - - - - - - - - - - tgttgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tggtact