1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...cgatattcgtctatctggcacagtttttttctctcttcagtttacctgctctagctgctcgtcgttgacattcaggagccaccccaaaaaaaaaatacagGGCGAGGAGCAAAAGAAGCTGGATGTACTGTCCAACGAGGTCTTCGTGAAGGCGCTCGTCAGCAGCGGCCGCACC
species | Zea mays |
transcript | GRMZM2G322953_T05 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGAGAGACCAACGTCCAG GGCGAGGAGCAAAAGAAGCTGGATGTACTGTCCAACGAGGTCTTCGTGAAGEST: gi|22490108|gb|BU050031.1|BU050031
genomic: AGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGAGAGACCAACGTCCAGgcaagcacgg ... aaaaatacagGGCGAGGAGCAAAAGAAGCTGGATGTACTGTCCAACGAGGTCTTCGTGAAG
EST: AGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGAGAGACCAACGTCCAG GGCGAGGAGCAAAAGAAGCTGGATGTACTGTCCAACGAGGTCTTCGTGAAGEST: gi|211164076|gb|FL013514.1|FL013514
genomic: AGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGAGAGACCAACGTCCAGgcaagcacgg ... aaaaatacagGGCGAGGAGCAAAAGAAGCTGGATGTACTGTCCAACGAGGTCTTCGTGAAG
EST: AGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGAGAGACCAACGTCCAG GGCGAGGAGCAAAAGAAGCTGGATGTCCTGTCCAACGAGGTCTTCGTGAAGEST: gi|211164070|gb|FL013508.1|FL013508
genomic: AGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGAGAGACCAACGTCCAGgcaagcacgg ... aaaaatacagGGCGAGGAGCAAAAGAAGCTGGATGTACTGTCCAACGAGGTCTTCGTGAAG
EST: AGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGAGAGACCAACGTCCAG GGCGAGGAGCAAAAGAAGCTGGATGTCCTGTCCAACGAGGTCTTCGTGAAGEST: gi|18654939|gb|BM499744.1|BM499744
genomic: AGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGAGAGACCAACGTCCAGgcaagcacgg ... aaaaatacagGGCGAGGAGCAAAAGAAGCTGGATGTACTGTCCAACGAGGTCTTCGTGAAG
EST: AGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGAGAGACCAACGTCCAG GGCGAGGAGCAAAAGAAGCTGGATGTACTGTCCAACGAGGTCTTCGTGAAG
genomic: AGGCCGGCCTCGCCAAGCTCATCGGCCTCGCCGGAGAGACCAACGTCCAGgcaagcacgg ... aaaaatacagGGCGAGGAGCAAAAGAAGCTGGATGTACTGTCCAACGAGGTCTTCGTGAAG
ctgctctagctgctcgtcgttgacattcaggagccaccccaaaaaaaaaatacagGGCGAGGAGCAAAAGAAGCTGGATGTACTGTCCAACGAGGTCTTCGTGAAGGCGCTCGTCAGCAGCGGCCGCACC
cgttgac putative branch site (score: 4)
aaaaaaaaaataca TA-rich tract